RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RPL32P62910 135 aaKnown RBP8.35□□□□□ -1.07
COL12A1-201ENST00000322507 MFRPQ9BY79 579 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 MED13LQ71F56 2210 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM243Q9BU79 118 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 SIRT4Q9Y6E7 314 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-201ENST00000322507 ANAPC1Q9H1A4 1944 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 EGR2P11161 476 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-201ENST00000322507 ORMDL3Q8N138 153 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 RPL31P62899 125 aaKnown RBP8.34□□□□□ -1.07
COL12A1-201ENST00000322507 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 A0A1B0GTL3 188 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 SLC23A3Q6PIS1 610 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 AMN1Q8IY45 258 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 VWA8A3KMH1 1905 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 RRN3P1Q2M238 152 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 MRGPRFQ96AM1 343 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 RAX2Q96IS3 184 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 GPR35Q9HC97 309 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 HELZP42694 1942 aaKnown RBP8.34□□□□□ -1.07
COL12A1-201ENST00000322507 GUSBP11Q6P575 273 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 UNQ5815/PRO19632Q6UWF5 114 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-201ENST00000322507 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 ANOS1P23352 680 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 UCP3P55916 312 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 RHNO1Q9BSD3 238 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
COL12A1-201ENST00000322507 ARPC1AQ92747 370 aa8.34□□□□□ -1.07
COL12A1-201ENST00000322507 RPS11P62280 158 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL12A1-201ENST00000322507 CXorf67Q86X51 503 aaPredicted RBP8.34□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BLQ99880 126 aa8.34□□□□□ -1.08
COL12A1-201ENST00000322507 LOC285556D6RIA3 1793 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 DLL1O00548 723 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 WNT5AP41221 380 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 ATP5EP56381 51 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 TM4SF20Q53R12 229 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 SF3B6Q9Y3B4 125 aaKnown RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 SYNGR3O43761 229 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 FUT5Q11128 374 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 ZNF385AQ96PM9 386 aaKnown RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 COL11A2P13942 1736 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 DEFB108AA8MXU0 73 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 EFNB1P98172 346 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 GATAD1Q8WUU5 269 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 R4GN57 208 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 TNCP24821 2201 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 RPL8P62917 257 aaKnown RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 LYRM9A8MSI8 78 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 SOCS3O14543 225 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 A0A1B0GUT8 65 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 RPUSD1Q9UJJ7 312 aaKnown RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 TSSC4Q9Y5U2 329 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 MED19A0JLT2 244 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-201ENST00000322507 NRN1LQ496H8 165 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 CT55Q8WUE5 264 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
COL12A1-201ENST00000322507 IZUMO1RA6ND01 250 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 ZNF658BQ4V348 819 aaPredicted RBP8.32□□□□□ -1.08
COL12A1-201ENST00000322507 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 CEACAM18A8MTB9 384 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 NPFFO15130 113 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 IGKCP01834 107 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PPBPP02775 128 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 CXCL2P19875 107 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PGFP49763 221 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 SLX1AQ9BQ83 275 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PCDH15Q96QU1 1955 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 FAM240AA0A1B0GVK7 77 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 SPINT1O43278 529 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 FAM222BQ8WU58 562 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 YPEL1O60688 119 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 NCR2O95944 276 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 SYNJ2BPP57105 145 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PSG3Q16557 428 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 FBLIM1Q8WUP2 373 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PRDM14Q9GZV8 571 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 USF3Q68DE3 2245 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 TANC2Q9HCD6 1990 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 K7EP34 96 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 BGLAPP02818 100 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 PYY3Q5JQD4 70 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 ST6GALNAC6Q969X2 333 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
COL12A1-201ENST00000322507 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
COL12A1-201ENST00000322507 NDUFA3O95167 84 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms