RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 IGHV3-35A0A0C4DH35 117 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 SSBP4Q9BWG4 385 aaPredicted RBP12.76□□□□□ -0.37
VARS2-201ENST00000321897 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 hADV38S2A0JD32 116 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 PRR33A8MZF0 331 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 TNFSF13O75888 250 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 PKIBQ9C010 78 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 CALYQ9NYX4 217 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 KIAA1549LQ6ZVL6 1849 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 IGKV1-6A0A0C4DH72 117 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 CRYABP02511 175 aaKnown RBP12.75□□□□□ -0.37
VARS2-201ENST00000321897 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
VARS2-201ENST00000321897 IL15RAQ13261 267 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 TM4SF20Q53R12 229 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 ZNF106Q9H2Y7 1883 aaKnown RBP12.75□□□□□ -0.37
VARS2-201ENST00000321897 LOC389332A0A1B0GUA5 103 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 PLA2G5P39877 138 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 ZNF841Q6ZN19 808 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 BPIFA4PQ86YQ2 179 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 LRTM2Q8N967 370 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 HIF1ANQ9NWT6 349 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 S4R3C0 116 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 MGST3O14880 152 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 VENTXO95231 258 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 PFN1P07737 140 aaKnown RBP12.75□□□□□ -0.37
VARS2-201ENST00000321897 CYC1P08574 325 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 CT45A1Q5HYN5 189 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 CT45A3Q8NHU0 189 aa12.75□□□□□ -0.37
VARS2-201ENST00000321897 NUP210Q8TEM1 1887 aaPredicted RBP12.74□□□□□ -0.37
VARS2-201ENST00000321897 MYOD1P15172 320 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 LINC00470Q9BZP3 86 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
VARS2-201ENST00000321897 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
VARS2-201ENST00000321897 PEAR1Q5VY43 1037 aaPredicted RBP12.74□□□□□ -0.37
VARS2-201ENST00000321897 TMEM167BQ9NRX6 74 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 C2CD3Q4AC94 2353 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 LEPROTL1O95214 131 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 NMUP48645 174 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 FBLN7Q53RD9 439 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 NMSQ5H8A3 153 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 LINC01551Q86U37 167 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 CHRDL1Q9BU40 450 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
VARS2-201ENST00000321897 CEACAM18A8MTB9 384 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 RND2P52198 227 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.374e-6■■■■□ 25.4
VARS2-201ENST00000321897 LYZP61626 148 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 SLC25A34Q6PIV7 304 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 ACP7Q6ZNF0 438 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 MBD3L1Q8WWY6 194 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 TMEM45BQ96B21 275 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 NPVFQ9HCQ7 196 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 SLC25A10Q9UBX3 287 aaPredicted RBP12.73□□□□□ -0.37
VARS2-201ENST00000321897 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 PMCHL1Q16048 86 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
VARS2-201ENST00000321897 MAP1LC3CQ9BXW4 147 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 ZNRD1Q9P1U0 126 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 TCF19Q9Y242 345 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A10PA6NDY2 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A18PA6NE21 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A16PA6NEW6 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A20PA6NIJ5 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A8PA6NJQ4 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A7PA6NKC0 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A22PA8MWA6 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A12PA8MX19 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A5PA8MXJ8 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A23PA8MXZ1 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 C16orf97H3BN30 126 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 SLC25A17O43808 307 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 HLA-DQA1P01909 254 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A15PP0C7V4 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A13PP0C7W8 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A14PP0C7W9 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 FAM90A24PP0C7X0 464 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 CCL3L1P16619 93 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 GCHFRP30047 84 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 RPEQ96AT9 228 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 NEU1Q99519 415 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 IL36BQ9NZH7 164 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 WISP2O76076 250 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 ADH4P08319 380 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 SAPCD1Q5SSQ6 148 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 RPRMLQ8N4K4 120 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 ZFP30Q9Y2G7 519 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
VARS2-201ENST00000321897 F11RQ9Y624 299 aaKnown RBP12.73□□□□□ -0.37
VARS2-201ENST00000321897 A0A1B0GW64 132 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 LYNX1G3V0Z9 82 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 MT-ND6P03923 174 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 CT45A10P0DMU9 189 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 LYNX1P0DP58 116 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 COL8A1P27658 744 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms