RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 TMEM189A5PLL7 270 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 LILRA1O75019 489 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 NAPSAO96009 420 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 GFRA1P56159 465 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 NMSQ5H8A3 153 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 CYYR1Q96J86 154 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 LIME1Q9H400 295 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 IDI2-AS1Q9NZ38 188 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 BTF3P20290 206 aaKnown RBP12.91□□□□□ -0.34
GCFC2-201ENST00000321027 IGHV1-2P23083 117 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 CKS2P33552 79 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 LY6G6EA0A0G2JKS1 128 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 CA2P00918 260 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 COTL1Q14019 142 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 U3KQA8 63 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 LOXL3P58215 753 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 SPATA45Q537H7 98 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 PEAR1Q5VY43 1037 aaPredicted RBP12.91□□□□□ -0.34
GCFC2-201ENST00000321027 GATA2P23769 480 aaPredicted RBP12.91□□□□□ -0.34
GCFC2-201ENST00000321027 REC114Q7Z4M0 266 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 SRSF12Q8WXF0 261 aaKnown RBP12.91□□□□□ -0.34
GCFC2-201ENST00000321027 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
GCFC2-201ENST00000321027 SNCGO76070 127 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 CGAP01215 116 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 LYL1P12980 280 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 HERVK_113P61574 105 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 C9orf106Q8NAJ2 232 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 MYO18BQ8IUG5 2567 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 C1QTNF9P0C862 333 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 FOXA3P55318 350 aaPredicted RBP12.9□□□□□ -0.34
GCFC2-201ENST00000321027 FAM27E3Q08E93 113 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 VENTXO95231 258 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 IL6RP08887 468 aaPredicted RBP12.9□□□□□ -0.34
GCFC2-201ENST00000321027 PF4V1P10720 104 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 LYRM7Q5U5X0 104 aa12.9□□□□□ -0.34
GCFC2-201ENST00000321027 ACACBO00763 2458 aa12.9□□□□□ -0.35
GCFC2-201ENST00000321027 GFRA3O60609 400 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 FOLR2P14207 255 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 UCNP55089 124 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 RNFT1Q5M7Z0 435 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 IGHV3OR16-13A0A075B7E8 117 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 IGHV3-74A0A0B4J1X5 117 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 MOSP00540 346 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 CSRP1P21291 193 aaKnown RBP12.89□□□□□ -0.35
GCFC2-201ENST00000321027 ZNF497Q6ZNH5 498 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 OR4C13Q8NGP0 309 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 NUP210Q8TEM1 1887 aaPredicted RBP12.89□□□□□ -0.35
GCFC2-201ENST00000321027 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 IGFBP2P18065 325 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 RPP25LQ8N5L8 163 aaKnown RBP12.89□□□□□ -0.35
GCFC2-201ENST00000321027 ZNF738Q8NE65 137 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 DIRC2Q96SL1 478 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 M0R3E3 92 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 MAS1LP35410 378 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 C2orf83Q53S99 150 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 UNQ5815/PRO19632Q6UWF5 114 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 TCF23Q7RTU1 214 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 OR4B1Q8NGF8 309 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 ATG101Q9BSB4 218 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 ZFP30Q9Y2G7 519 aa12.89□□□□□ -0.35
GCFC2-201ENST00000321027 J3QW42 95 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 IGKV1-5P01602 117 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 PCSK4Q6UW60 755 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 Q6ZRM9 215 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 ABHD17AQ96GS6 310 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 NCOA6Q14686 2063 aaPredicted RBP12.88□□□□□ -0.35
GCFC2-201ENST00000321027 PSPNO60542 156 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 GTF3AQ92664 365 aaKnown RBP12.88□□□□□ -0.35
GCFC2-201ENST00000321027 SPRR3Q9UBC9 169 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 C20orf204Q6ZNR8 217 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 GOLT1AQ6ZVE7 132 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 CACNA1AO00555 2505 aa12.88□□□□□ -0.35
GCFC2-201ENST00000321027 CRXO43186 299 aaPredicted RBP12.87□□□□□ -0.35
GCFC2-201ENST00000321027 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 H3BVH4 76 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
GCFC2-201ENST00000321027 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 HERPUD1Q15011 391 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
GCFC2-201ENST00000321027 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 LINC00205P59089 165 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
GCFC2-201ENST00000321027 PYY3Q5JQD4 70 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 OR4A47Q6IF82 309 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 FAM216BQ8N7L0 139 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 K7ERU9 68 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 SIAH2O43255 324 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 OR1N2Q8NGR9 330 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 RAB37Q96AX2 223 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 HIST1H2BLQ99880 126 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 UQCR10Q9UDW1 63 aa12.87□□□□□ -0.35
GCFC2-201ENST00000321027 KIF26AQ9ULI4 1882 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms