RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 C9JCJ5 164 aa7.97□□□□□ -1.13
PTPRA-202ENST00000318266 CDKN1BP46527 198 aa7.97□□□□□ -1.13
PTPRA-202ENST00000318266 ERVK-16P61578 105 aa7.97□□□□□ -1.13
PTPRA-202ENST00000318266 RPL19P84098 196 aaKnown RBP7.97□□□□□ -1.13
PTPRA-202ENST00000318266 Q8IYB0 196 aa7.97□□□□□ -1.13
PTPRA-202ENST00000318266 WASHC3Q9Y3C0 194 aa7.97□□□□□ -1.13
PTPRA-202ENST00000318266 CACNA1HO95180 2353 aa7.97□□□□□ -1.13
PTPRA-202ENST00000318266 GGTLC3B5MD39 225 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 ITGB1BP1O14713 200 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 CER1O95813 267 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 DUSP3P51452 185 aaPredicted RBP7.96□□□□□ -1.13
PTPRA-202ENST00000318266 TMEM249Q2WGJ8 235 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 NRN1LQ496H8 165 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 LYSMD4Q5XG99 296 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 SLC25A40Q8TBP6 338 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 TCF19Q9Y242 345 aa7.96□□□□□ -1.13
PTPRA-202ENST00000318266 ARFGEF3Q5TH69 2177 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 FAM181BA6NEQ2 426 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 HLA-DQA1P01909 254 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 DUTP33316 252 aaKnown RBP7.96□□□□□ -1.14
PTPRA-202ENST00000318266 UTF1Q5T230 341 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 HES3Q5TGS1 186 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF596Q8TC21 504 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 NEUROG1Q92886 237 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 OR8B2Q96RD0 313 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 LINC00470Q9BZP3 86 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 TMEM140Q9NV12 185 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 IL19Q9UHD0 177 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 ARL2-SNX15V9GYD0 113 aa7.96□□□□□ -1.14
PTPRA-202ENST00000318266 YLPM1P49750 1951 aaKnown RBP7.96□□□□□ -1.14
PTPRA-202ENST00000318266 TET2Q6N021 2002 aaPredicted RBP7.96□□□□□ -1.14
PTPRA-202ENST00000318266 IGHV2-26A0A0B4J1V2 119 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 TOMM40O96008 361 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 CFIP05156 583 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 PSG1P11464 419 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 CA7P43166 264 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 VDAC2P45880 294 aaPredicted RBP7.95□□□□□ -1.14
PTPRA-202ENST00000318266 MLANAQ16655 118 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 LOC400499M0QZD8 3231 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 IGKV3D-15A0A087WSY6 115 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 TRAV9-2A0A087WT02 112 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 IGHV2-70DA0A0C4DH43 119 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 OR2T8A6NH00 312 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 PRSS46E5RG02 174 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 NPY1RP25929 384 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 MPV17P39210 176 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 FOXA3P55318 350 aaPredicted RBP7.95□□□□□ -1.14
PTPRA-202ENST00000318266 IL11RAQ14626 422 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 TRAT1Q6PIZ9 186 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 VHLLQ6RSH7 139 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 LINC00696Q6ZRV3 163 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 PPP1R32Q7Z5V6 425 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 SPACA3Q8IXA5 215 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 DUSP23Q9BVJ7 150 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 BOKQ9UMX3 212 aaPredicted RBP7.95□□□□□ -1.14
PTPRA-202ENST00000318266 IGLC7A0M8Q6 106 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 NUDT3O95989 172 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 RAB31Q13636 194 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 C19orf35Q6ZS72 473 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 OR4F17Q8NGA8 305 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 OR52E5Q8NH55 327 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 OR2T6Q8NHC8 308 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 NABP2Q9BQ15 211 aa7.95□□□□□ -1.14
PTPRA-202ENST00000318266 MRPS16Q9Y3D3 137 aaKnown RBP7.95□□□□□ -1.14
PTPRA-202ENST00000318266 LSM4Q9Y4Z0 139 aaKnown RBP7.95□□□□□ -1.14
PTPRA-202ENST00000318266 SAA2-SAA4A0A096LPE2 208 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 IGHV1-69-2A0A0G2JMI3 117 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 K7EP13 123 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 UBE2G1P62253 170 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 PLGLB1Q02325 96 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 TBC1D28Q2M2D7 210 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 GDF5OSQ5U4N7 250 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 SLC35E4Q6ICL7 350 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 OR4A47Q6IF82 309 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 SAP25Q8TEE9 199 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 CHODLQ9H9P2 273 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 SPINT2O43291 252 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 SMPD2O60906 423 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 LYZL6O75951 148 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 CXCL12P48061 93 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 SELENOVP59797 346 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 PLA2G2CQ5R387 149 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF841Q6ZN19 808 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 LINC00173Q6ZV60 143 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 FAM214BQ7L5A3 538 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 OR2D3Q8NGH3 330 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF891A8MT65 544 aaPredicted RBP7.93□□□□□ -1.14
PTPRA-202ENST00000318266 AREGP15514 252 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF503Q96F45 646 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 S1PR3Q99500 378 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 ENY2Q9NPA8 101 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 DKK4Q9UBT3 224 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 CEP192Q8TEP8 1941 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 CADP27708 2225 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms