RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 DSPP15924 2871 aaKnown RBP8.69□□□□□ -1.02
COL3A1-202ENST00000317840 IGHV2OR16-5A0A0B4J2B6 119 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 OR5G3P0C626 314 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 COL8A2P25067 703 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 NABP2Q9BQ15 211 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 SNHG12Q9BXW3 62 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 TMPRSS2O15393 492 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 RAB1CQ92928 201 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 TMEM167BQ9NRX6 74 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 TECRQ9NZ01 308 aaKnown RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 TNRC6AQ8NDV7 1962 aaKnown RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 REG1BP48304 166 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 UBE2L3P68036 154 aaKnown RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 PAFAH1B2P68402 229 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 RELBQ01201 579 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 PIP4P1Q86T03 277 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 MOB3BQ86TA1 216 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 BEND2Q8NDZ0 799 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 CCL13Q99616 98 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 POLR3KQ9Y2Y1 108 aaPredicted RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 IGKV1D-17A0A075B6S4 117 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 KIR2DL2P43627 348 aaPredicted RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 KIR2DS2P43631 304 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 ZNF134P52741 427 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 KRTCAP3Q53RY4 240 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 EAF1Q96JC9 268 aaPredicted RBP8.68□□□□□ -1.02
COL3A1-202ENST00000317840 SLC35E1Q96K37 410 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 HES4Q9HCC6 221 aa8.68□□□□□ -1.02
COL3A1-202ENST00000317840 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 DIRC3C9JPN6 131 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 P0C879 139 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 SAA2P0DJI9 122 aaPredicted RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 ARSJQ5FYB0 599 aaPredicted RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 C1orf185Q5T7R7 199 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 SSBP3Q9BWW4 388 aaPredicted RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 CAMPP49913 170 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 TNFAIP6P98066 277 aaPredicted RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 C1orf194Q5T5A4 169 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 RBMXL3Q8N7X1 1067 aaKnown RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 RAXQ9Y2V3 346 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 YPEL1O60688 119 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 BRS3P32247 399 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 RPL15P61313 204 aaKnown RBP8.67□□□□□ -1.02
COL3A1-202ENST00000317840 VWC2Q2TAL6 325 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 YPEL2Q96QA6 119 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 CLCF1Q9UBD9 225 aa8.67□□□□□ -1.02
COL3A1-202ENST00000317840 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 C15orf65H3BRN8 121 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 PROP1O75360 226 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 PLAUP00749 431 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 CA1P00915 261 aaPredicted RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 IGKV3-15P01624 115 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 SRIP30626 198 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 ERHP84090 104 aaKnown RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 IBA57Q5T440 356 aaKnown RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 GCSAMQ8N6F7 178 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 SGK494Q96LW2 274 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 PRNDQ9UKY0 176 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 PLXNB1O43157 2135 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 IGHV1-18A0A0C4DH31 117 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 A6NNC1 897 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 COX7A2P2O60397 106 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 HSBP1O75506 76 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 APOA2P02652 100 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 RPLP1P05386 114 aaKnown RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 PDLIM4P50479 330 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 MLANAQ16655 118 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 STARD4Q96DR4 205 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 TMEM68Q96MH6 324 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 IFI27L2Q9H2X8 130 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 SRRM5B3KS81 715 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 ENSAO43768 121 aaKnown RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 VDAC2P45880 294 aaPredicted RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 PRR30Q53SZ7 412 aaPredicted RBP8.66□□□□□ -1.02
COL3A1-202ENST00000317840 TMEM108Q6UXF1 575 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 SPACA3Q8IXA5 215 aa8.66□□□□□ -1.02
COL3A1-202ENST00000317840 C16orf97H3BN30 126 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 CT45A1Q5HYN5 189 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 WDR73Q6P4I2 378 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 CT45A3Q8NHU0 189 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 Q8TCH9 128 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 HARBI1Q96MB7 349 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.02
COL3A1-202ENST00000317840 F2Z2F3 143 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 USF1P22415 310 aaPredicted RBP8.65□□□□□ -1.02
COL3A1-202ENST00000317840 CDKN1AP38936 164 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 MFAP2P55001 183 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 TDRG1Q3Y452 100 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 FAM216BQ8N7L0 139 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 ADTRPQ96IZ2 230 aa8.65□□□□□ -1.02
COL3A1-202ENST00000317840 NGBQ9NPG2 151 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms