RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 DEFB125Q8N687 156 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 P2RX4Q99571 388 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 PPP1R3CQ9UQK1 317 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.18□□□□□ -0.46
HOXA3-201ENST00000317201 FAM231BA6NCW3 169 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 PHF1O43189 567 aaPredicted RBP12.18□□□□□ -0.46
HOXA3-201ENST00000317201 MDH2P40926 338 aaKnown RBP12.18□□□□□ -0.46
HOXA3-201ENST00000317201 TCF24Q7RTU0 167 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 ODF3L1Q8IXM7 274 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 AGMATQ9BSE5 352 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 SPTBN4Q9H254 2564 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 CDIPTO14735 213 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 HS3ST1O14792 307 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 Q6P435 159 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 OR10V1Q8NGI7 309 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 LHX4Q969G2 390 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 GEMIN7Q9H840 131 aaKnown RBP12.18□□□□□ -0.46
HOXA3-201ENST00000317201 OR51B2Q9Y5P1 312 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 FCN1O00602 326 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 THBS3P49746 956 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 C22orf34Q6ZV56 151 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 ZNF488Q96MN9 340 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 NGBQ9NPG2 151 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 CFHR2P36980 270 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 IER3P46695 156 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
HOXA3-201ENST00000317201 GPHA2Q96T91 129 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 IL36RNQ9UBH0 155 aa12.17□□□□□ -0.46
HOXA3-201ENST00000317201 TRAV1-1A0A0B4J248 108 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 TRAV24A0A0B4J272 114 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
HOXA3-201ENST00000317201 DEGS1O15121 323 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 THBDP07204 575 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 GRPP07492 148 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 MSMPQ1L6U9 139 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 BATF2Q8N1L9 274 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 NAA60Q9H7X0 242 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 A0A1W2PS18 150 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 CNIH1O95406 144 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 BRI3O95415 125 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 CA2P00918 260 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 OR10J4P0C629 311 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 PDCD1Q15116 288 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 GAPTQ8N292 157 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 C19orf24Q9BVV8 132 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 PGPEP1Q9NXJ5 209 aa12.16□□□□□ -0.46
HOXA3-201ENST00000317201 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
HOXA3-201ENST00000317201 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 IFNA1P01562 189 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 KIR2DS4P43632 304 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 HTD2P86397 168 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 KIR2DS1Q14954 304 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 FAM90A1Q86YD7 464 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 ZGRF1Q86YA3 2104 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 HLA-DRB5Q30154 266 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 LIAT1Q6ZQX7 453 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 PERPQ96FX8 193 aa12.15□□□□□ -0.46
HOXA3-201ENST00000317201 IGF2RP11717 2491 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 A0A087X0K7 114 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 GATA4P43694 442 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 C5orf64Q2M2E5 130 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 Q6ZPA2 131 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 MOB1BQ7L9L4 216 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 BORCS7Q96B45 105 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 C18orf12Q96KH6 178 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 PEF1Q9UBV8 284 aaKnown RBP12.14□□□□□ -0.47
HOXA3-201ENST00000317201 DUSP13Q9UII6 198 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 ATP23Q9Y6H3 246 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 C7orf71A4D174 169 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 IFNA5P01569 189 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 SERPINE2P07093 398 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 SPATA31B1PQ5VZV4 182 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 BLNKQ8WV28 456 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 PIEZO1Q92508 2521 aa12.14□□□□□ -0.47
HOXA3-201ENST00000317201 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 CCL21O00585 134 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 OR2H2O95918 312 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 ZNF90Q03938 601 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 GTF2H5Q6ZYL4 71 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 SLC39A9Q9NUM3 307 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
HOXA3-201ENST00000317201 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms