RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 KCNS1Q96KK3 526 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 DPRXA6NFQ7 191 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 CECR9P0C854 216 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 ATP1A1-AS1Q5TC04 95 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 TMEM164Q5U3C3 297 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 CNEP1R1Q8N9A8 125 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 FAM122AQ96E09 287 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 PRO3102Q9H379 93 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 TMEM14BQ9NUH8 114 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 ZFHX4Q86UP3 3567 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 F2RL2O00254 374 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 OR10J4P0C629 311 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 SRIP30626 198 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 HSPE1P61604 102 aaKnown RBP11.03□□□□□ -0.64
SKA3-202ENST00000314759 CR1LQ2VPA4 569 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 C22orf15Q8WYQ4 148 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 CLCF1Q9UBD9 225 aa11.03□□□□□ -0.64
SKA3-202ENST00000314759 LOC105371242A0A075B767 164 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 IGHV3OR15-7A0A075B7D8 119 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 NTF3P20783 257 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 PRRX1P54821 245 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 OR4S2Q8NH73 311 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 FAM216AQ8WUB2 273 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 NEUROG1Q92886 237 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 ZNF503Q96F45 646 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 TRIB1Q96RU8 372 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 IL19Q9UHD0 177 aa11.02□□□□□ -0.64
SKA3-202ENST00000314759 SPENQ96T58 3664 aaKnown RBP11.02□□□□□ -0.64
SKA3-202ENST00000314759 TNCP24821 2201 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 BMPR1BO00238 502 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 MGST3O14880 152 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 ZNF324O75467 553 aaPredicted RBP11.02□□□□□ -0.65
SKA3-202ENST00000314759 TSPOP30536 169 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 HOXC12P31275 282 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 MRPL54Q6P161 138 aaKnown RBP11.02□□□□□ -0.65
SKA3-202ENST00000314759 MOB3BQ86TA1 216 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 OR2Z1Q8NG97 314 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
SKA3-202ENST00000314759 SRRM5B3KS81 715 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 KIR2DS2P43631 304 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 KLF3P57682 345 aaPredicted RBP11.02□□□□□ -0.65
SKA3-202ENST00000314759 UBE2V1Q13404 147 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 FER1L6-AS2Q96M78 137 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 NABP2Q9BQ15 211 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
SKA3-202ENST00000314759 SLC25A10Q9UBX3 287 aaPredicted RBP11.02□□□□□ -0.65
SKA3-202ENST00000314759 ASPMQ8IZT6 3477 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 MT-ND6P03923 174 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 CT45A1Q5HYN5 189 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 VWA1Q6PCB0 445 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 CT45A3Q8NHU0 189 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 HEATR1Q9H583 2144 aaKnown RBP11.01□□□□□ -0.65
SKA3-202ENST00000314759 ENY2Q9NPA8 101 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 IDI2-AS1Q9NZ38 188 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 SAA2-SAA4A0A096LPE2 208 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 SAA2P0DJI9 122 aaPredicted RBP11.01□□□□□ -0.65
SKA3-202ENST00000314759 GATA2P23769 480 aaPredicted RBP11.01□□□□□ -0.65
SKA3-202ENST00000314759 WDR73Q6P4I2 378 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 ERASQ7Z444 233 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 CLEC7AQ9BXN2 247 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 TMEM167BQ9NRX6 74 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 CALYQ9NYX4 217 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 TP73-AS1Q9UF72 201 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 ARL2-SNX15V9GYD0 113 aa11.01□□□□□ -0.65
SKA3-202ENST00000314759 GGTLC3B5MD39 225 aa11□□□□□ -0.65
SKA3-202ENST00000314759 KIR2DL2P43627 348 aaPredicted RBP11□□□□□ -0.65
SKA3-202ENST00000314759 SPRNQ5BIV9 151 aa11□□□□□ -0.65
SKA3-202ENST00000314759 MBNL2Q5VZF2 373 aaKnown RBP11□□□□□ -0.65
SKA3-202ENST00000314759 GCSAMQ8N6F7 178 aa11□□□□□ -0.65
SKA3-202ENST00000314759 GAL3ST2Q9H3Q3 398 aa11□□□□□ -0.65
SKA3-202ENST00000314759 COX11Q9Y6N1 276 aa11□□□□□ -0.65
SKA3-202ENST00000314759 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
SKA3-202ENST00000314759 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
SKA3-202ENST00000314759 IGLV2-8P01709 118 aa11□□□□□ -0.65
SKA3-202ENST00000314759 TIGITQ495A1 244 aa11□□□□□ -0.65
SKA3-202ENST00000314759 C1orf210Q8IVY1 113 aa11□□□□□ -0.65
SKA3-202ENST00000314759 CORO2AQ92828 525 aa11□□□□□ -0.65
SKA3-202ENST00000314759 MMP23AO75900 390 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 TOMM40O96008 361 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 CGB3P0DN86 165 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 CGB7P0DN87 165 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 SAPCD1Q5SSQ6 148 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
SKA3-202ENST00000314759 CDC42EP3Q9UKI2 254 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 OR51B2Q9Y5P1 312 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 NCOR1O75376 2440 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 FNDC10F2Z333 226 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 ISLRO14498 428 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 OR7C2O60412 319 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
SKA3-202ENST00000314759 C17orf58Q2M2W7 97 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms