RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 HTTP42858 3142 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 TFF3Q07654 80 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 PGPA6NDG6 321 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 BMPR1BO00238 502 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 IL6RP08887 468 aaPredicted RBP11.27□□□□□ -0.6
DDX54-202ENST00000314045 IGFBP2P18065 325 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 COL8A1P27658 744 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 CFHR2P36980 270 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 RARRES2Q99969 163 aa11.27□□□□□ -0.6
DDX54-202ENST00000314045 LINC00473A8K010 186 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 SEM1Q6ZVN7 128 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 C19orf24Q9BVV8 132 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 ANOS1P23352 680 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
DDX54-202ENST00000314045 GRNP28799 593 aaKnown RBP11.26□□□□□ -0.61
DDX54-202ENST00000314045 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
DDX54-202ENST00000314045 CAMPP49913 170 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 CYP2G1PQ6ZSU1 146 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 Q8TCH9 128 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 METTL26Q96S19 204 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 IL4P05112 153 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
DDX54-202ENST00000314045 WIPF3A6NGB9 483 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 KLRD1Q13241 179 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 WNT10AQ9GZT5 417 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 NAGKQ9UJ70 344 aa11.26□□□□□ -0.61
DDX54-202ENST00000314045 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 C20orf202A1L168 122 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 RRHO14718 337 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
DDX54-202ENST00000314045 FBXL7Q9UJT9 491 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 H3BTX0 84 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 FCN1O00602 326 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 P01737 135 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 TRGV3P03979 118 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 SLC25A48Q6ZT89 311 aaKnown RBP11.25□□□□□ -0.61
DDX54-202ENST00000314045 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 SSC4DQ8WTU2 575 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 OR51M1Q9H341 326 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
DDX54-202ENST00000314045 UQCRFS1P47985 274 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 ZNF383Q8NA42 475 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
DDX54-202ENST00000314045 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
DDX54-202ENST00000314045 TPPP2P59282 170 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 BET1LQ9NYM9 111 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 MED12LQ86YW9 2145 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 DSCR9P59020 149 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 EFNB3Q15768 340 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
DDX54-202ENST00000314045 FAM90A9PA6NNJ1 464 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 J3KRW8 73 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
DDX54-202ENST00000314045 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 LIME1Q9H400 295 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 EML6Q6ZMW3 1958 aa11.24□□□□□ -0.61
DDX54-202ENST00000314045 A6NNC1 897 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
DDX54-202ENST00000314045 GCHFRP30047 84 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 DYNLRB2Q8TF09 96 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
DDX54-202ENST00000314045 SONP18583 2426 aaKnown RBP11.23□□□□□ -0.61
DDX54-202ENST00000314045 ARFGEF3Q5TH69 2177 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 A0A1W2PS18 150 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 H0Y8G0 127 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
DDX54-202ENST00000314045 MAS1LP35410 378 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 Q8NA96 180 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 Q8NFD4 153 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 OR10W1Q8NGF6 305 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 IGHV3OR16-13A0A075B7E8 117 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 IGHV3-74A0A0B4J1X5 117 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 FAM74A7A6NL05 159 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 ORM1P02763 201 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 FAM106AQ4KMX7 169 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
DDX54-202ENST00000314045 VMO1Q7Z5L0 202 aa11.23□□□□□ -0.61
DDX54-202ENST00000314045 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms