RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TFF3Q07654 80 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 MRPL13Q9BYD1 178 aaKnown RBP11.14□□□□□ -0.63
SNED1-201ENST00000310397 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
SNED1-201ENST00000310397 HTN1P15515 57 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 ADIPOQQ15848 244 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 ZNF124Q15973 351 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 IGKV1D-43A0A0B4J1Z2 117 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 SCGB1A1P11684 91 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 SERF1AO75920 110 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 STARD6P59095 220 aa11.14□□□□□ -0.63
SNED1-201ENST00000310397 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNED1-201ENST00000310397 A0A1W2PQM1 296 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 H7C2G1 150 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
SNED1-201ENST00000310397 DLX6P56179 175 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 NOTCH4Q99466 2003 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 GFI1Q99684 422 aa11.13□□□□□ -0.63
SNED1-201ENST00000310397 PRSS2P07478 247 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 RPP21Q9H633 154 aaKnown RBP11.12□□□□□ -0.63
SNED1-201ENST00000310397 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
SNED1-201ENST00000310397 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 LINC00271P0C7V0 271 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 ID3Q02535 119 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 FADS6Q8N9I5 356 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 STAG3L3P0CL85 134 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 CTSSP25774 331 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 LOXL3P58215 753 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 IFI27L2Q9H2X8 130 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 ZNF703Q9H7S9 590 aaPredicted RBP11.12□□□□□ -0.63
SNED1-201ENST00000310397 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
SNED1-201ENST00000310397 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 MRPS18CQ9Y3D5 142 aaKnown RBP11.12□□□□□ -0.63
SNED1-201ENST00000310397 HCFC1P51610 2035 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 ATRXP46100 2492 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 GLRXP35754 106 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 SAP25Q8TEE9 199 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 ATP5G3P48201 142 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 ZNF71Q9NQZ8 489 aaPredicted RBP11.12□□□□□ -0.63
SNED1-201ENST00000310397 TRBV20OR9-2A0A075B6H5 130 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 IGHV3-72A0A0B4J1Y9 119 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 PROB1E7EW31 1015 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
SNED1-201ENST00000310397 LYPD3O95274 346 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 PAQR4Q8N4S7 273 aaPredicted RBP11.11□□□□□ -0.63
SNED1-201ENST00000310397 TMEM144Q7Z5S9 345 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
SNED1-201ENST00000310397 DYNLRB2Q8TF09 96 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 LHFPL1Q86WI0 220 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 OBSL1O75147 1896 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 IGFBP2P18065 325 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 CIARTQ8N365 385 aaPredicted RBP11.11□□□□□ -0.63
SNED1-201ENST00000310397 ZIC3O60481 467 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 REG1AP05451 166 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 FOXC1Q12948 553 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 FAM19A2Q8N3H0 131 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
SNED1-201ENST00000310397 TMEM160Q9NX00 188 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
SNED1-201ENST00000310397 TMEM190Q8WZ59 177 aa11.11□□□□□ -0.63
SNED1-201ENST00000310397 C17orf98A8MV24 154 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 LEAP2Q969E1 77 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 JKAMPQ9P055 326 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 TGFBR3LH3BV60 316 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 BEND2Q8NDZ0 799 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 GPR82Q96P67 336 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 TRAV9-2A0A087WT02 112 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 ADMP35318 185 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 MRPS16Q9Y3D3 137 aaKnown RBP11.1□□□□□ -0.63
SNED1-201ENST00000310397 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 CEACAM1P13688 526 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 RPL39P5Q59GN2 51 aa11.1□□□□□ -0.63
SNED1-201ENST00000310397 ZNF497Q6ZNH5 498 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 FOXL1Q12952 345 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 ZNRF1Q8ND25 227 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 NPIPB11E5RHQ5 1161 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 PILRBQ9UKJ0 227 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 PATE3B3GLJ2 98 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 TIMM23BQ5SRD1 257 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
SNED1-201ENST00000310397 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.63
SNED1-201ENST00000310397 PRR32B1ATL7 298 aa11.08□□□□□ -0.64
SNED1-201ENST00000310397 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms