RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 GAGE2EQ4V326 116 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 VSTM2AQ8TAG5 236 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 FOXC2Q99958 501 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 NCOR1P1Q9H4R4 102 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 GAGE2DQ9UEU5 116 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 CCL20P78556 96 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 CYP2G1PQ6ZSU1 146 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 TAF15Q92804 592 aaKnown RBP eCLIP7.89□□□□□ -1.15
XCR1-201ENST00000309285 LOXL4Q96JB6 756 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 EAF1Q96JC9 268 aaPredicted RBP7.89□□□□□ -1.15
XCR1-201ENST00000309285 NPFFR1Q9GZQ6 430 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 NCOA6Q14686 2063 aaPredicted RBP7.89□□□□□ -1.15
XCR1-201ENST00000309285 OR10W1Q8NGF6 305 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 FLYWCH2Q96CP2 140 aaKnown RBP7.89□□□□□ -1.15
XCR1-201ENST00000309285 KCNS1Q96KK3 526 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 J3QT63 122 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 PSG1P11464 419 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 ZNF562Q6V9R5 426 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 GBGT1Q8N5D6 347 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 BMPERQ8N8U9 685 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 FAM222BQ8WU58 562 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 CCL13Q99616 98 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 MGST2Q99735 147 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 NAA38Q9BRA0 125 aaKnown RBP7.89□□□□□ -1.15
XCR1-201ENST00000309285 WNT5BQ9H1J7 359 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 CACNA1AO00555 2505 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 FER1L5A0AVI2 2057 aa7.89□□□□□ -1.15
XCR1-201ENST00000309285 MC5RP33032 325 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 C1QL2Q7Z5L3 287 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 RCC1LQ96I51 464 aaKnown RBP7.88□□□□□ -1.15
XCR1-201ENST00000309285 LINC00470Q9BZP3 86 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 TMSB15BA0A087X1C1 80 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 TMEM14DPA8MWL7 114 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 C10orf128Q5T292 105 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 CLDND2Q8NHS1 167 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 CYSLTR1Q9Y271 337 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.88□□□□□ -1.15
XCR1-201ENST00000309285 CLDN14O95500 239 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 PPP1R17O96001 155 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 FOXA3P55318 350 aaPredicted RBP7.88□□□□□ -1.15
XCR1-201ENST00000309285 ICAM4Q14773 271 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 PPIAL4EA0A075B759 164 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 CELA3AP09093 270 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 PPIAL4FP0DN26 164 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 MAS1LP35410 378 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 ZNF826PQ6ZT77 177 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 TTC9CQ8N5M4 171 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 SIGLEC12Q96PQ1 595 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 RNF122Q9H9V4 155 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 PPIAL4AQ9Y536 164 aa7.88□□□□□ -1.15
XCR1-201ENST00000309285 TRAV21A0A0B4J279 112 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 AMY1AP04745 511 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 KCNMB1Q16558 191 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 FAM71F2Q6NXP2 309 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 C10orf35Q96D05 121 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 TMEM222Q9H0R3 208 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 KIAA2026Q5HYC2 2103 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 TEX38Q6PEX7 206 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 INO80CQ6PI98 192 aaPredicted RBP7.87□□□□□ -1.15
XCR1-201ENST00000309285 TMEM186Q96B77 213 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 HAX1O00165 279 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 ITGB1BP1O14713 200 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 ADMP35318 185 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 UCNP55089 124 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 SNRNP40Q96DI7 357 aaKnown RBP7.87□□□□□ -1.15
XCR1-201ENST00000309285 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
XCR1-201ENST00000309285 FREM1Q5H8C1 2179 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 SPG11Q96JI7 2443 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 TRAV8-4A0A0B4J246 113 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 C7orf71A4D174 169 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 C9orf172C9J069 976 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 LINC00869P0C866 280 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 FAM214BQ7L5A3 538 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 MAP1LC3AQ9H492 121 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 DEPPQ9NTK1 212 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 SLC25A10Q9UBX3 287 aaPredicted RBP7.87□□□□□ -1.15
XCR1-201ENST00000309285 MED13Q9UHV7 2174 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 DOPEY1Q5JWR5 2465 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 RPL23P62829 140 aaKnown RBP7.87□□□□□ -1.15
XCR1-201ENST00000309285 CDPF1Q6NVV7 123 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 OR2K2Q8NGT1 345 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 TMEM54Q969K7 222 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 ELOVL5Q9NYP7 299 aa7.87□□□□□ -1.15
XCR1-201ENST00000309285 PLCE1Q9P212 2302 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 RAB9AP51151 201 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 PSMG4Q5JS54 123 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 TNFRSF14Q92956 283 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 SPANXN1Q5VSR9 72 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 PAQR4Q8N4S7 273 aaPredicted RBP7.86□□□□□ -1.15
XCR1-201ENST00000309285 ZNF883P0CG24 379 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 ACSF3Q4G176 576 aaPredicted RBP7.86□□□□□ -1.15
XCR1-201ENST00000309285 OCIAD2Q56VL3 154 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 ORAOV1Q8WV07 137 aa7.86□□□□□ -1.15
XCR1-201ENST00000309285 OTOGLQ3ZCN5 2332 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms