RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 LCE6AA0A183 80 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 A0A1W2PNU3 283 aaPredicted RBP0.9□□□□□ -2.27
CEP290-201ENST00000309041 NDUFAF8A1L188 74 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 APOC4-APOC2K7ER74 178 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 ARPC3O15145 178 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 NKX2-2O95096 273 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 OR9G9P0C7N8 305 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 GNB3P16520 340 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 NPPCP23582 126 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 HTR1FP30939 366 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 ZNF80P51504 273 aaPredicted RBP0.9□□□□□ -2.27
CEP290-201ENST00000309041 TAS2R46P59540 309 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 UBE2NP61088 152 aaKnown RBP0.9□□□□□ -2.27
CEP290-201ENST00000309041 SLC25A34Q6PIV7 304 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 SPINT4Q6UDR6 99 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 SLC16A14Q7RTX9 510 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 TMEM139Q8IV31 216 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 OR5H2Q8NGV7 314 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 ZNF419Q96HQ0 510 aaPredicted RBP0.9□□□□□ -2.27
CEP290-201ENST00000309041 TMEM242Q9NWH2 141 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 HAO2Q9NYQ3 351 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 GRHPRQ9UBQ7 328 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 TMED3Q9Y3Q3 217 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 FER1L6Q2WGJ9 1857 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 SCN9AQ15858 1988 aa0.9□□□□□ -2.27
CEP290-201ENST00000309041 IGHV3-35A0A0C4DH35 117 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 LOC107984640A0A0U1RRK4 108 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR1I1O60431 355 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 RBMXL2O75526 392 aaKnown RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 VAMP5O95183 116 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 PRG2P13727 222 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 HLA-DMBP28068 263 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 CCR8P51685 355 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 MFAP4P55083 255 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 UBE2BP63146 152 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 GPR107Q5VW38 600 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 IDO2Q6ZQW0 420 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 LINC00336Q6ZUF6 198 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZADH2Q8N4Q0 377 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 RAB42Q8N4Z0 105 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 NRACQ8N912 160 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ST6GALNAC3Q8NDV1 305 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR11L1Q8NGX0 322 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 THEM6Q8WUY1 208 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 PSMF1Q92530 271 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TOMM6Q96B49 74 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ADAT3Q96EY9 351 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF479Q96JC4 524 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 MGST2Q99735 147 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF436Q9C0F3 470 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 CCDC134Q9H6E4 229 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 NAA60Q9H7X0 242 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 AP5S1Q9NUS5 200 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TXNL4BQ9NX01 149 aaKnown RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 ANAPC10Q9UM13 185 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 APOBP04114 4563 aaKnown RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 ARHGEF17Q96PE2 2063 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 TRBV24-1A0A075B6N3 115 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TRAV10A0A0B4J240 114 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF727A8MUV8 499 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 UQCRQO14949 82 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TOMM40O96008 361 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 CD8AP01732 235 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 IGLV7-43P04211 117 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR5AC1P0C628 307 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF705BP0CI00 300 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF888P0CJ79 500 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 RAB8AP61006 207 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 RPS11P62280 158 aaKnown RBP eCLIP0.89□□□□□ -2.27
CEP290-201ENST00000309041 RGNQ15493 299 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TAL2Q16559 108 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ACOT6Q3I5F7 207 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 PHYHD1Q5SRE7 291 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 CELF3Q5SZQ8 465 aaKnown RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 C19orf48Q6RUI8 117 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 RASL11AQ6T310 242 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TMEM86AQ8N2M4 240 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR1L8Q8NGR8 309 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR2A12Q8NGT7 310 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR1F12Q8NHA8 337 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 VKORC1Q9BQB6 163 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 UPK3BQ9BT76 320 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 C1QTNF5Q9BXJ0 243 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 HES7Q9BYE0 225 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.89□□□□□ -2.273e-15■■■■■ 56.9
CEP290-201ENST00000309041 MDC1Q14676 2089 aaKnown RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 IGHV2-26A0A0B4J1V2 119 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 A0A0J9YY10 115 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 A0A1B0GX78 115 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 RBFOX3A6NFN3 312 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 M0R1B8 84 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 CCL21O00585 134 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF354AO60765 605 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 ZNF780AO75290 641 aaPredicted RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 HYPMO75409 117 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 RBM11P57052 281 aaKnown RBP0.89□□□□□ -2.27
CEP290-201ENST00000309041 FOXI1Q12951 378 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 TPBGQ13641 420 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 FAM209AQ5JX71 171 aa0.89□□□□□ -2.27
CEP290-201ENST00000309041 OR9G4Q8NGQ1 327 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms