RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CD46P15529 392 aa13.45□□□□□ -0.26
CCDC8-201ENST00000307522 RNPS1Q15287 305 aaKnown RBP13.45□□□□□ -0.26
CCDC8-201ENST00000307522 TMEM136Q6ZRR5 245 aa13.45□□□□□ -0.26
CCDC8-201ENST00000307522 CXorf67Q86X51 503 aaPredicted RBP13.45□□□□□ -0.26
CCDC8-201ENST00000307522 FAM168AQ92567 244 aa13.45□□□□□ -0.26
CCDC8-201ENST00000307522 CORO2AQ92828 525 aa13.45□□□□□ -0.26
CCDC8-201ENST00000307522 KCNIP2Q9NS61 270 aa13.45□□□□□ -0.26
CCDC8-201ENST00000307522 CDC42EP3Q9UKI2 254 aa13.45□□□□□ -0.26
CCDC8-201ENST00000307522 MRPS16Q9Y3D3 137 aaKnown RBP13.45□□□□□ -0.26
CCDC8-201ENST00000307522 C21orf140B9A014 251 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 NPY1RP25929 384 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 CRYBB3P26998 211 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 CEBPDP49716 269 aaPredicted RBP13.44□□□□□ -0.26
CCDC8-201ENST00000307522 MRPL49Q13405 166 aaKnown RBP13.44□□□□□ -0.26
CCDC8-201ENST00000307522 VKORC1L1Q8N0U8 176 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 FER1L6-AS2Q96M78 137 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 TRAPPC2LQ9UL33 140 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 TNCP24821 2201 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 MORN2Q502X0 79 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 CENPWQ5EE01 88 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 MUC15Q8N387 334 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 SFXN3Q9BWM7 321 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 V9GYV3 84 aa13.44□□□□□ -0.26
CCDC8-201ENST00000307522 TRAV9-2A0A087WT02 112 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 TRAV24A0A0B4J272 114 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 DEFB108AA8MXU0 73 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 TM4SF5O14894 197 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 CGAP01215 116 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 FOXA3P55318 350 aaPredicted RBP13.43□□□□□ -0.26
CCDC8-201ENST00000307522 TRGV5A0A0B4J1U4 118 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 RNF212BA8MTL3 300 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 PPIAL4DF5H284 164 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 LHFPL4Q7Z7J7 247 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 SGK494Q96LW2 274 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 RALYQ9UKM9 306 aaKnown RBP13.43□□□□□ -0.26
CCDC8-201ENST00000307522 IGHV3-43A0A0B4J1X8 118 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 C17orf98A8MV24 154 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 KLRC4-KLRK1H3BQV0 150 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 IGHV3-43DP0DP04 118 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 ALKBH6Q3KRA9 238 aa13.43□□□□□ -0.26
CCDC8-201ENST00000307522 PDLIM3Q53GG5 364 aaPredicted RBP13.43□□□□□ -0.26
CCDC8-201ENST00000307522 EAF1Q96JC9 268 aaPredicted RBP13.43□□□□□ -0.26
CCDC8-201ENST00000307522 LRP5LA4QPB2 252 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 K7ERU9 68 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 PRB4P10163 310 aaPredicted RBP13.42□□□□□ -0.26
CCDC8-201ENST00000307522 TCF15Q12870 199 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 OR2D3Q8NGH3 330 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 PMS2P5A8MQ11 134 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 DEGS1O15121 323 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 OR10J4P0C629 311 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 USF1P22415 310 aaPredicted RBP13.42□□□□□ -0.26
CCDC8-201ENST00000307522 FOXL2NBQ6ZUU3 175 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 RPRMLQ8N4K4 120 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 OR4P4Q8NGL7 312 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 TIMM9Q9Y5J7 89 aa13.42□□□□□ -0.26
CCDC8-201ENST00000307522 CIDEAO60543 219 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 APCSP02743 223 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 TMEM42Q69YG0 159 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 MKXQ8IYA7 352 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 LSM10Q969L4 123 aaKnown RBP13.41□□□□□ -0.26
CCDC8-201ENST00000307522 CD1BP29016 333 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 FGF12P61328 243 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 Q8N7P7 452 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 TPRX1Q8N7U7 411 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 C18orf32Q8TCD1 76 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 OR4C46A6NHA9 309 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 FBLL1A6NHQ2 334 aaKnown RBP13.41□□□□□ -0.26
CCDC8-201ENST00000307522 AHRRA9YTQ3 701 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 BVES-AS1Q5T3Y7 98 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 C10orf35Q96D05 121 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 CHRDL1Q9BU40 450 aa13.41□□□□□ -0.26
CCDC8-201ENST00000307522 SF3B5Q9BWJ5 86 aaKnown RBP13.41□□□□□ -0.26
CCDC8-201ENST00000307522 LRRC30A6NM36 301 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 KLK10O43240 276 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 GNG4P50150 75 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 FOXF2Q12947 444 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.26
CCDC8-201ENST00000307522 C17orf112F2Z3M2 114 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
CCDC8-201ENST00000307522 ZNF138P52744 262 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 UBE2G1P62253 170 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 RFESDQ8TAC1 157 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 RAB37Q96AX2 223 aa13.4□□□□□ -0.26
CCDC8-201ENST00000307522 KLF13Q9Y2Y9 288 aaPredicted RBP13.4□□□□□ -0.26
CCDC8-201ENST00000307522 VWA1Q6PCB0 445 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 MRPL21Q7Z2W9 205 aaKnown RBP13.39□□□□□ -0.27
CCDC8-201ENST00000307522 ABHD12Q8N2K0 398 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 DLL3Q9NYJ7 618 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 HILPDAQ9Y5L2 63 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 COL27A1Q8IZC6 1860 aaPredicted RBP13.39□□□□□ -0.27
CCDC8-201ENST00000307522 M0R1X1 148 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 CORTO00230 105 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 APOA2P02652 100 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 C5orf30Q96GV9 206 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 GNB1LQ9BYB4 327 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms