RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 KCNIP1Q9NZI2 227 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 RNF115Q9Y4L5 304 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 RBFOX2O43251 390 aaKnown RBP eCLIP9.09□□□□□ -0.95
LSM3-201ENST00000306024 CELA3BP08861 270 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 CA6P23280 308 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 GPM6AP51674 278 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 ALKBH6Q3KRA9 238 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 SLC25A40Q8TBP6 338 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 CLEC7AQ9BXN2 247 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 TECRQ9NZ01 308 aaKnown RBP9.09□□□□□ -0.95
LSM3-201ENST00000306024 MUC21A0A0G2JKD1 596 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 MUC21A0A140T8X8 626 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 OR4C46A6NHA9 309 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 BCL3P20749 454 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 MUC21Q5SSG8 566 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 SSMEM1Q8WWF3 244 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 NPCDR1Q9BY65 106 aa9.09□□□□□ -0.95
LSM3-201ENST00000306024 FNDC4Q9H6D8 234 aaPredicted RBP9.09□□□□□ -0.95
LSM3-201ENST00000306024 NCKAP5O14513 1909 aa9.09□□□□□ -0.96
LSM3-201ENST00000306024 A0A0G2JNJ9 132 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 LINC00869P0C866 280 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 G6PCP35575 357 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 CA7P43166 264 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 MFAP2P55001 183 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 LRRC10Q5BKY1 277 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 ZNF841Q6ZN19 808 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 Q6ZRM9 215 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 OR5P3Q8WZ94 311 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 TNFRSF14Q92956 283 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 Q9UFV3 132 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 SPG11Q96JI7 2443 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 A0A1W2PS18 150 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 HELTA6NFD8 242 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 FOXI3A8MTJ6 420 aaPredicted RBP9.08□□□□□ -0.96
LSM3-201ENST00000306024 RHBDL1O75783 438 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 Q0VG73 95 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 GCSAMLQ5JQS6 135 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 C1orf162Q8NEQ5 155 aaPredicted RBP9.08□□□□□ -0.96
LSM3-201ENST00000306024 OR8B3Q8NGG8 313 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 DMDP11532 3685 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 IGHV2-26A0A0B4J1V2 119 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 J3QR89 54 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 CORTO00230 105 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 SNAI2O43623 268 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 GOSR1O95249 250 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 TIMM23BQ5SRD1 257 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 BPIFA4PQ86YQ2 179 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 FGFRL1Q8N441 504 aa9.08□□□□□ -0.96
LSM3-201ENST00000306024 PNRC2Q9NPJ4 139 aaKnown RBP9.08□□□□□ -0.96
LSM3-201ENST00000306024 IGKV1-12A0A0C4DH73 117 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 PPIAL4DF5H284 164 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 CXorf1O96002 111 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 IGKV1D-12P01611 117 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 ANOS1P23352 680 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 RAB37Q96AX2 223 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 TMEM186Q96B77 213 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 RTL8AQ9BWD3 113 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 CRIM1Q9NZV1 1036 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 SAP30O75446 220 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 CECR9P0C854 216 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 PSG9Q00887 426 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 HAPLN4Q86UW8 402 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 LSM10Q969L4 123 aaKnown RBP9.07□□□□□ -0.96
LSM3-201ENST00000306024 ZG16O60844 167 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 AMY1AP04745 511 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 ZNF474Q6S9Z5 364 aaPredicted RBP9.07□□□□□ -0.96
LSM3-201ENST00000306024 PQLC2Q6ZP29 291 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 SSX8Q7RTT4 187 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 POM121L2Q96KW2 1035 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 C11orf1Q9H5F2 150 aa9.07□□□□□ -0.96
LSM3-201ENST00000306024 IGLC7A0M8Q6 106 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 MMP23AO75900 390 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 IGLL1P15814 213 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 OR10J3Q5JRS4 329 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 OR4P4Q8NGL7 312 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 GNB1LQ9BYB4 327 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 IL36RNQ9UBH0 155 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 FREM2Q5SZK8 3169 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 IGKV1-27A0A075B6S5 117 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 ZNF207O43670 478 aaKnown RBP9.06□□□□□ -0.96
LSM3-201ENST00000306024 CRYGSP22914 178 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 ODF3L1Q8IXM7 274 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 NAA38Q9BRA0 125 aaKnown RBP9.06□□□□□ -0.96
LSM3-201ENST00000306024 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 FAM234AQ9H0X4 552 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 SAP30LQ9HAJ7 183 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 USF3Q68DE3 2245 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 C7orf71A4D174 169 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 BMPR1BO00238 502 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 SMPD2O60906 423 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 CD1BP29016 333 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 MZT1Q08AG7 82 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms