RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 A0A1W2PRE2 83 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 RAXQ9Y2V3 346 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 IQCF6A8MYZ5 107 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 NPIPB11E5RHQ5 1161 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 PPIAL4CA0A0B4J2A2 164 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 FAM90A9PA6NNJ1 464 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 ATXN7O15265 892 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-201ENST00000304636 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 PPIAL4GP0DN37 164 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-201ENST00000304636 TEX45Q8NA69 505 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 GREB1Q4ZG55 1949 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 EBLN2Q6P2I7 272 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 AGMATQ9BSE5 352 aa10.78□□□□□ -0.68
COL3A1-201ENST00000304636 MRPL16Q9NX20 251 aaKnown RBP10.78□□□□□ -0.68
COL3A1-201ENST00000304636 C15orf61A6NNL5 157 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 RAMP3O60896 148 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 ORMDL3Q8N138 153 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 PGPEP1LA6NFU8 196 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 TIMP3P35625 211 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 PSG7Q13046 419 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 ACTL10Q5JWF8 245 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 CACNA1IQ9P0X4 2223 aa10.77□□□□□ -0.68
COL3A1-201ENST00000304636 SCN8AQ9UQD0 1980 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 RP1P56715 2156 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 YPEL1O60688 119 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 GATA2P23769 480 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-201ENST00000304636 GLRXP35754 106 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 YPEL2Q96QA6 119 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 ALPK2Q86TB3 2170 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 DLEU1O43261 78 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 PRSS2P07478 247 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 CRYGSP22914 178 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 IMMP1LQ96LU5 166 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 KIR2DL4Q99706 377 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 A0A1B0GWB2 263 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 H3BUT2 72 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 QRFPP83859 136 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 MRPL52Q86TS9 123 aaKnown RBP10.77□□□□□ -0.69
COL3A1-201ENST00000304636 Q9H3A6 140 aa10.77□□□□□ -0.69
COL3A1-201ENST00000304636 IGKV1-12A0A0C4DH73 117 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 E9PQ18 207 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 IGKV1D-12P01611 117 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 EFNB3Q15768 340 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
COL3A1-201ENST00000304636 OR4X2Q8NGF9 303 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 FGF11Q92914 225 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 VWCEQ96DN2 955 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 DNAJC13O75165 2243 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 CELA3AP09093 270 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 NMSQ5H8A3 153 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 A6NNC1 897 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 FOXI3A8MTJ6 420 aaPredicted RBP10.76□□□□□ -0.69
COL3A1-201ENST00000304636 LINC00614P0C842 121 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
COL3A1-201ENST00000304636 DCTN5Q9BTE1 182 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 SSBP4Q9BWG4 385 aaPredicted RBP10.76□□□□□ -0.69
COL3A1-201ENST00000304636 SIP14410 1827 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 UPK2O00526 184 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 NKX2-8O15522 239 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 CECR9P0C854 216 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 OTORQ9NRC9 128 aa10.76□□□□□ -0.69
COL3A1-201ENST00000304636 A0A1W2PRS3 328 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 NDUFS6O75380 124 aaKnown RBP10.75□□□□□ -0.69
COL3A1-201ENST00000304636 GPX1P07203 203 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 CFPP27918 469 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 TFPI2P48307 235 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 ST20Q9HBF5 79 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 EPOPA6NHQ4 379 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 PAPPA-AS1Q5QFB9 102 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 SAMD13Q5VXD3 122 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
COL3A1-201ENST00000304636 SIGLEC12Q96PQ1 595 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 FOXC2Q99958 501 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 DEPPQ9NTK1 212 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 CIRBPQ14011 172 aaKnown RBP10.75□□□□□ -0.69
COL3A1-201ENST00000304636 LINC01551Q86U37 167 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 PNKDQ8N490 385 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 VCX2Q9H322 139 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 A0A0G2JMM0 328 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 A0A1W2PPB8 328 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 KIR3DP1A8MWS1 328 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 MEF2CQ06413 473 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-201ENST00000304636 ATP5L2Q7Z4Y8 100 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 CRIPAKQ8N1N5 446 aa10.75□□□□□ -0.69
COL3A1-201ENST00000304636 SPAARA0A1B0GVQ0 90 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 STAG3L3P0CL85 134 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 NPPCP23582 126 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 TIMM23BQ5SRD1 257 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 EPDR1Q9UM22 224 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 ANK1P16157 1881 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 PPP1R17O96001 155 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms