RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 FOXI3A8MTJ6 420 aaPredicted RBP13.63□□□□□ -0.23
BRD3-201ENST00000303407 SIAH2O43255 324 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 CSRP1P21291 193 aaKnown RBP13.63□□□□□ -0.23
BRD3-201ENST00000303407 CACNA1IQ9P0X4 2223 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 C5orf52A6NGY3 159 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 IGHV1-46P01743 117 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 IGHV3-66A0A0C4DH42 116 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 ARPC1AQ92747 370 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 FMC1Q96HJ9 113 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 ZNF581Q9P0T4 197 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 UQCR10Q9UDW1 63 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 CLDN16Q9Y5I7 305 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 PHLDA3Q9Y5J5 127 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 TBR1Q16650 682 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 PLSCR4Q9NRQ2 329 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 NUDT3O95989 172 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 TMEM42Q69YG0 159 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 TUBA4BQ9H853 241 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 MDS2Q8NDY4 140 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 FBXL7Q9UJT9 491 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 DLX1P56177 255 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 FOXL2NBQ6ZUU3 175 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 TMEM144Q7Z5S9 345 aa13.62□□□□□ -0.23
BRD3-201ENST00000303407 LILRA1O75019 489 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 HLA-DRB1P01911 266 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 C5orf24Q7Z6I8 188 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 ATOH7Q8N100 152 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 WNT10AQ9GZT5 417 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 GPX1P07203 203 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 DLX6P56179 175 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 RNFT1Q5M7Z0 435 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 C1QTNF9BB2RNN3 333 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 FAM53AQ6NSI3 398 aaPredicted RBP13.61□□□□□ -0.23
BRD3-201ENST00000303407 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 OR10AG1Q8NH19 301 aa13.61□□□□□ -0.23
BRD3-201ENST00000303407 PPP1R27Q86WC6 154 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 RNASE6Q93091 150 aaKnown RBP13.6□□□□□ -0.23
BRD3-201ENST00000303407 CBLN4Q9NTU7 201 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 TRGV3P03979 118 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 RPL24P83731 157 aaKnown RBP13.6□□□□□ -0.23
BRD3-201ENST00000303407 SAPCD1Q5SSQ6 148 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 TMEM133Q9H2Q1 129 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 Q9H3A6 140 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 THADAQ6YHU6 1953 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 TCF21O43680 179 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 CIDEAO60543 219 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 AUP1Q9Y679 476 aa13.6□□□□□ -0.23
BRD3-201ENST00000303407 NAPSAO96009 420 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 E9PLN8 166 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
BRD3-201ENST00000303407 PSPNO60542 156 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 C21orf62Q9NYP8 219 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 CD5P06127 495 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 SOD3P08294 240 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 PRCDQ00LT1 54 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 GCSAMLQ5JQS6 135 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 REG4Q9BYZ8 158 aa13.59□□□□□ -0.23
BRD3-201ENST00000303407 ZNF207O43670 478 aaKnown RBP13.58□□□□□ -0.23
BRD3-201ENST00000303407 TCF24Q7RTU0 167 aa13.58□□□□□ -0.23
BRD3-201ENST00000303407 RAXQ9Y2V3 346 aa13.58□□□□□ -0.23
BRD3-201ENST00000303407 IGHV3-49A0A0A0MS15 119 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 CDKN1AP38936 164 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 OR1N2Q8NGR9 330 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 HEATR5BQ9P2D3 2071 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 C1QTNF9P0C862 333 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 FOXA3P55318 350 aaPredicted RBP13.58□□□□□ -0.24
BRD3-201ENST00000303407 GNG5P63218 68 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 HGFACQ04756 655 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 M0R3E3 92 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 IGKV3-15P01624 115 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
BRD3-201ENST00000303407 TRAV9-1A0A075B6T8 112 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 SRRM5B3KS81 715 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 NBR2O15453 112 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 HOXA5P20719 270 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 TIMP3P35625 211 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 GPR82Q96P67 336 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 COL25A1Q9BXS0 654 aaPredicted RBP13.57□□□□□ -0.24
BRD3-201ENST00000303407 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.57□□□□□ -0.24
BRD3-201ENST00000303407 GPR183P32249 361 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 DNLZQ5SXM8 178 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 ARHGEF17Q96PE2 2063 aaPredicted RBP13.57□□□□□ -0.24
BRD3-201ENST00000303407 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 WISP1O95388 367 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 NMSQ5H8A3 153 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 RNASE7Q9H1E1 156 aaKnown RBP13.57□□□□□ -0.24
BRD3-201ENST00000303407 HIST1H1AQ02539 215 aaPredicted RBP13.57□□□□□ -0.24
BRD3-201ENST00000303407 SLC25A34Q6PIV7 304 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 MBD3L1Q8WWY6 194 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 KCNS1Q96KK3 526 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms