RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TMEM250H0YL14 139 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 PRRG2O14669 202 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 CA2P00918 260 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 IL3RAP26951 378 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 FAM27E3Q08E93 113 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 GABRA6Q16445 453 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 Q6ZT83 130 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 SFRP2Q96HF1 295 aa11.71□□□□□ -0.54
SDC2-201ENST00000302190 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.54
SDC2-201ENST00000302190 KALRNO60229 2985 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 HLA-DRB5Q30154 266 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 SPATA31B1PQ5VZV4 182 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 CA1P00915 261 aaPredicted RBP11.7□□□□□ -0.54
SDC2-201ENST00000302190 RBP4P02753 201 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 Q6P435 159 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 OR4C5Q8NGB2 326 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 ZNF355PQ9NSJ1 428 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 FAM90A26D6RGX4 464 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 DKK1O94907 266 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 RNF7Q9UBF6 113 aa11.7□□□□□ -0.54
SDC2-201ENST00000302190 RAB7AP51149 207 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 NUP210LQ5VU65 1888 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 VAMP3Q15836 100 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 TNXAQ16473 311 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 COLCA1Q6ZS62 124 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 FLYWCH2Q96CP2 140 aaKnown RBP11.69□□□□□ -0.54
SDC2-201ENST00000302190 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
SDC2-201ENST00000302190 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 PRSS47A8MTI9 375 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 MLNRO43193 412 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 MLANAQ16655 118 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
SDC2-201ENST00000302190 DLL1O00548 723 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 IL6RP08887 468 aaPredicted RBP11.68□□□□□ -0.54
SDC2-201ENST00000302190 LINC00869P0C866 280 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 ZNF883P0CG24 379 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
SDC2-201ENST00000302190 Q56UQ5 140 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 OCC1Q8TAD7 63 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 RNASEH2CQ8TDP1 164 aaKnown RBP11.68□□□□□ -0.54
SDC2-201ENST00000302190 COQ2Q96H96 371 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 hADV38S2A0JD32 116 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 CHEK1O14757 476 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 PAX1P15863 534 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 GCHFRP30047 84 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.54
SDC2-201ENST00000302190 Q6ZN92 141 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 MMD2Q8IY49 270 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 TRGV8A0A0C4DH27 118 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 NDUFB3O43676 98 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
SDC2-201ENST00000302190 CENPWQ5EE01 88 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 C1orf194Q5T5A4 169 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 STARD4Q96DR4 205 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 NABP2Q9BQ15 211 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 WNT10AQ9GZT5 417 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 SAP30LQ9HAJ7 183 aa11.68□□□□□ -0.54
SDC2-201ENST00000302190 SEPSECSQ9HD40 501 aaKnown RBP11.68□□□□□ -0.54
SDC2-201ENST00000302190 WISP2O76076 250 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
SDC2-201ENST00000302190 LYZP61626 148 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 GNB2P62879 340 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 LYPD6BQ8NI32 183 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 HSPB7Q9UBY9 170 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 LOC102724200A0A096LPH7 203 aaPredicted RBP11.67□□□□□ -0.54
SDC2-201ENST00000302190 SLC25A17O43808 307 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 PRSS8Q16651 343 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 NRN1LQ496H8 165 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 ST6GALNAC3Q8NDV1 305 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 IGHV2OR16-5A0A0B4J2B6 119 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 DIRC3C9JPN6 131 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 CCL3L1P16619 93 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 SRIP30626 198 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 FOXC1Q12948 553 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 KRTCAP3Q53RY4 240 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
SDC2-201ENST00000302190 CEACAM1P13688 526 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 TNFRSF1AP19438 455 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 IL19Q9UHD0 177 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 FOXH1O75593 365 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 MOSP00540 346 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 WT1P19544 449 aaPredicted RBP11.66□□□□□ -0.54
SDC2-201ENST00000302190 BRS3P32247 399 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 FOXA3P55318 350 aaPredicted RBP11.66□□□□□ -0.54
SDC2-201ENST00000302190 GFRALQ6UXV0 394 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms