RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 Q8N7P7 452 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 RELNP78509 3460 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 SAA2-SAA4A0A096LPE2 208 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 TRBV9A0A0B4J1U6 114 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 IGHV2-26A0A0B4J1V2 119 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 ZNF324O75467 553 aaPredicted RBP12.87□□□□□ -0.35
UBAP1-201ENST00000297661 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 COL8A2P25067 703 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 VAMP3Q15836 100 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 RPEL1Q2QD12 228 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 FAM19A2Q8N3H0 131 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 RAB1CQ92928 201 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 UHRF2Q96PU4 802 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 TLN1Q9Y490 2541 aaKnown RBP12.87□□□□□ -0.35
UBAP1-201ENST00000297661 KALRNO60229 2985 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 WDR82Q6UXN9 313 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 ACP7Q6ZNF0 438 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 FAM214BQ7L5A3 538 aa12.87□□□□□ -0.35
UBAP1-201ENST00000297661 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 C9orf106Q8NAJ2 232 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 TMEM178AQ8NBL3 297 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 FDCSPQ8NFU4 85 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 TRAV30A0A087WSZ9 112 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 IGHV1-69-2A0A0G2JMI3 117 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 H2BFWTQ7Z2G1 175 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 ERASQ7Z444 233 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
UBAP1-201ENST00000297661 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.86□□□□□ -0.35
UBAP1-201ENST00000297661 IGLC7A0M8Q6 106 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 CA2P00918 260 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 CECR9P0C854 216 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 RPL31P62899 125 aaKnown RBP12.85□□□□□ -0.35
UBAP1-201ENST00000297661 STUMQ69YW2 141 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 WDR31Q8NA23 367 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 NBASA2RRP1 2371 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 IGHV3OR15-7A0A075B7D8 119 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 P0C879 139 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 NTF3P20783 257 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 S100A7P31151 101 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 HOXC12P31275 282 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
UBAP1-201ENST00000297661 UTF1Q5T230 341 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 Q6ZT83 130 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 BORCS7Q96B45 105 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 CDC42EP3Q9UKI2 254 aa12.85□□□□□ -0.35
UBAP1-201ENST00000297661 SRIP30626 198 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 KIR2DL2P43627 348 aaPredicted RBP12.84□□□□□ -0.35
UBAP1-201ENST00000297661 CATR1Q13166 79 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 CD177Q8N6Q3 437 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 YTHDF2Q9Y5A9 579 aaKnown RBP12.84□□□□□ -0.35
UBAP1-201ENST00000297661 RRHO14718 337 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 SPRNQ5BIV9 151 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 LRRC29Q8WV35 223 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 CST9LQ9H4G1 147 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 DUSP13Q9UII6 198 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 V9GYV3 84 aa12.84□□□□□ -0.35
UBAP1-201ENST00000297661 MT-ND6P03923 174 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 REG1AP05451 166 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 OR9G9P0C7N8 305 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 SLC35B1P78383 322 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 OCIAD2Q56VL3 154 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 SLC35E4Q6ICL7 350 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 INO80CQ6PI98 192 aaPredicted RBP12.83□□□□□ -0.35
UBAP1-201ENST00000297661 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 PNKDQ8N490 385 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 OR2Z1Q8NG97 314 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 TSKUQ8WUA8 353 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 LEAP2Q969E1 77 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 CXXC4Q9H2H0 198 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 WDR83OSQ9Y284 106 aa12.83□□□□□ -0.35
UBAP1-201ENST00000297661 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
UBAP1-201ENST00000297661 FCGR3BO75015 233 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 STAG3L2P0CL84 134 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 STAG3L3P0CL85 134 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 CD1BP29016 333 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 WDR73Q6P4I2 378 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 EAF1Q96JC9 268 aaPredicted RBP12.83□□□□□ -0.36
UBAP1-201ENST00000297661 COL6A6A6NMZ7 2263 aa12.83□□□□□ -0.36
UBAP1-201ENST00000297661 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
UBAP1-201ENST00000297661 MUC15Q8N387 334 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 ROS1P08922 2347 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 PROP1O75360 226 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 CLDN14O95500 239 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 PMCHL1Q16048 86 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 ZNF718Q3SXZ3 478 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 RPL39P5Q59GN2 51 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms