RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TNFRSF14Q92956 283 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 UBE2CO00762 179 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 ENSAO43768 121 aaKnown RBP17.2■□□□□ 0.34
SOX17-201ENST00000297316 IL3RAP26951 378 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 HCP5Q6MZN7 132 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 OR4C13Q8NGP0 309 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 MGST2Q99735 147 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 PLEKHA3Q9HB20 300 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 WASHC3Q9Y3C0 194 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 CEBPGP53567 150 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 B2MP61769 119 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 RAB11AP62491 216 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 SOHLH1Q5JUK2 328 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 RBMS3Q6XE24 437 aaKnown RBP17.2■□□□□ 0.34
SOX17-201ENST00000297316 CYB561D1Q8N8Q1 229 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 ZNF709Q8N972 641 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 SMDT1Q9H4I9 107 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 TPSG1Q9NRR2 321 aa17.2■□□□□ 0.34
SOX17-201ENST00000297316 PUS1Q9Y606 427 aaKnown RBP eCLIP17.2■□□□□ 0.34
SOX17-201ENST00000297316 DLK1P80370 383 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 GGACTQ9BVM4 153 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 TMPRSS5Q9H3S3 457 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 SLC39A9Q9NUM3 307 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 IGHV1-3A0A0C4DH29 117 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 GOSR1O95249 250 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 C10orf55Q5SWW7 151 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 PCGF1Q9BSM1 259 aa17.19■□□□□ 0.34
SOX17-201ENST00000297316 HSPB1P04792 205 aaKnown RBP17.18■□□□□ 0.34
SOX17-201ENST00000297316 BCL2P10415 239 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 COL8A1P27658 744 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 S100A12P80511 92 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 LHFPL4Q7Z7J7 247 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 MOB3BQ86TA1 216 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 LPAR2Q9HBW0 351 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 INSIG2Q9Y5U4 225 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 CGB1A6NKQ9 187 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 M0R1W7 72 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 CNTFRP26992 372 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 RPL8P62917 257 aaKnown RBP17.18■□□□□ 0.34
SOX17-201ENST00000297316 PAX2Q02962 417 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 FABP9Q0Z7S8 132 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 KHDC3LQ587J8 217 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 VMO1Q7Z5L0 202 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 TMEM167AQ8TBQ9 72 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 GGTLC1Q9BX51 225 aa17.18■□□□□ 0.34
SOX17-201ENST00000297316 POLQO75417 2590 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 CELSR1Q9NYQ6 3014 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 C17orf112F2Z3M2 114 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 LY6LH3BQJ8 138 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 YIF1AO95070 293 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 PDLIM4P50479 330 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 MRGPRG-AS1Q2M3A8 158 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 OR5B3Q8NH48 314 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 NANPQ8TBE9 248 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 RPEQ96AT9 228 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 NDUFA4L2Q9NRX3 87 aa17.17■□□□□ 0.34
SOX17-201ENST00000297316 LSM4Q9Y4Z0 139 aaKnown RBP17.17■□□□□ 0.34
SOX17-201ENST00000297316 CTXND1A0A1B0GTU2 59 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 S100A8P05109 93 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 PRTN3P24158 256 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 SLC16A13Q7RTY0 426 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 RAB24Q969Q5 203 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 HILPDAQ9Y5L2 63 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 USP9YO00507 2555 aaPredicted RBP17.16■□□□□ 0.34
SOX17-201ENST00000297316 NAV3Q8IVL0 2385 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 SLC25A17O43808 307 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 MBP02144 154 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 ATP5J2P56134 94 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 MIC13Q5XKP0 118 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 OR11H6Q8NGC7 330 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 ZNF430Q9H8G1 570 aaPredicted RBP17.16■□□□□ 0.34
SOX17-201ENST00000297316 FKBP11Q9NYL4 201 aa17.16■□□□□ 0.34
SOX17-201ENST00000297316 RNASE2P10153 161 aaKnown RBP17.15■□□□□ 0.34
SOX17-201ENST00000297316 BSXQ3C1V8 233 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 GATAD1Q8WUU5 269 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 PERPQ96FX8 193 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 COMMD5Q9GZQ3 224 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 METTL1Q9UBP6 276 aaKnown RBP17.15■□□□□ 0.34
SOX17-201ENST00000297316 SMIM6P0DI80 62 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 COX6B1P14854 86 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 USF1P22415 310 aaPredicted RBP17.15■□□□□ 0.34
SOX17-201ENST00000297316 MC5RP33032 325 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 FAM168AQ92567 244 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 MALSU1Q96EH3 234 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 ACTR3CQ9C0K3 210 aaPredicted RBP17.15■□□□□ 0.34
SOX17-201ENST00000297316 NPVFQ9HCQ7 196 aa17.15■□□□□ 0.34
SOX17-201ENST00000297316 A0A1W2PPI3 338 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 MPDU1O75352 247 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 OR2C1O95371 312 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 MLANAQ16655 118 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 SSMEM1Q8WWF3 244 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 AMMECR1Q9Y4X0 333 aaPredicted RBP17.14■□□□□ 0.33
SOX17-201ENST00000297316 TENM4Q6N022 2769 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 ZFHX3Q15911 3703 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 S100A9P06702 114 aaKnown RBP17.14■□□□□ 0.33
SOX17-201ENST00000297316 HTR1DP28221 377 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 OPRK1P41145 380 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 ACOT6Q3I5F7 207 aaPredicted RBP17.14■□□□□ 0.33
SOX17-201ENST00000297316 OR1L8Q8NGR8 309 aa17.14■□□□□ 0.33
SOX17-201ENST00000297316 PXMP4Q9Y6I8 212 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms