RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 FOXI3A8MTJ6 420 aaPredicted RBP9.27□□□□□ -0.93
PBRM1-201ENST00000296302 WDR82Q6UXN9 313 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 SAP25Q8TEE9 199 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 ZNF418Q8TF45 676 aaPredicted RBP9.27□□□□□ -0.93
PBRM1-201ENST00000296302 MRPS16Q9Y3D3 137 aaKnown RBP9.27□□□□□ -0.93
PBRM1-201ENST00000296302 FAM166AQ6J272 317 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 DNASE2BQ8WZ79 361 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 PARP14Q460N5 1801 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 TRAV24A0A0B4J272 114 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 PPIAL4CA0A0B4J2A2 164 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 PPIAL4GP0DN37 164 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 TFPI2P48307 235 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 CDCP2Q5VXM1 449 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 DYNLRB2Q8TF09 96 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 ORAOV1Q8WV07 137 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 GDF15Q99988 308 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 MEGF9Q9H1U4 602 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 THSD7AQ9UPZ6 1657 aa9.27□□□□□ -0.93
PBRM1-201ENST00000296302 PTPRZ1P23471 2315 aaPredicted RBP9.26□□□□□ -0.93
PBRM1-201ENST00000296302 FAM90A9PA6NNJ1 464 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 NPPCP23582 126 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 PLPPR1Q8TBJ4 325 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 KBTBD11-OT1A0A1B0GTJ5 212 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 TSPAN13O95857 204 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 MST1P26927 711 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 TIMP3P35625 211 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 MS4A6AQ9H2W1 248 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 BEX4Q9NWD9 120 aaPredicted RBP9.26□□□□□ -0.93
PBRM1-201ENST00000296302 LYL1P12980 280 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 TMEM170BQ5T4T1 132 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 OR2K2Q8NGT1 345 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 Q9H3A6 140 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 A6NNC1 897 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 WBP1Q96G27 269 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 AGMATQ9BSE5 352 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 VSIRQ9H7M9 311 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 COL11A2P13942 1736 aaPredicted RBP9.26□□□□□ -0.93
PBRM1-201ENST00000296302 SHANK3Q9BYB0 1731 aa9.26□□□□□ -0.93
PBRM1-201ENST00000296302 CD55P08174 381 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 GLRXP35754 106 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 TIMM23BQ5SRD1 257 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 FNDC4Q9H6D8 234 aaPredicted RBP9.25□□□□□ -0.93
PBRM1-201ENST00000296302 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
PBRM1-201ENST00000296302 C15orf61A6NNL5 157 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 TSPOP30536 169 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 ACTL10Q5JWF8 245 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 ZNF319Q9P2F9 582 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 WNK3Q9BYP7 1800 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
PBRM1-201ENST00000296302 NDUFS6O75380 124 aaKnown RBP9.25□□□□□ -0.93
PBRM1-201ENST00000296302 TIAF1O95411 115 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 HBDP02042 147 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 ADCYAP1P18509 176 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 ZNF497Q6ZNH5 498 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 ZNF837Q96EG3 531 aaPredicted RBP9.25□□□□□ -0.93
PBRM1-201ENST00000296302 TIMP4Q99727 224 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
PBRM1-201ENST00000296302 IGLV3-32A0A0A0MS00 114 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 YPEL1O60688 119 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 RFPL3SP0C7P2 107 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 YPEL2Q96QA6 119 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 UBTD1Q9HAC8 227 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 EPDR1Q9UM22 224 aa9.25□□□□□ -0.93
PBRM1-201ENST00000296302 UPK2O00526 184 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 TMEM50AO95807 157 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 PF4V1P10720 104 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
PBRM1-201ENST00000296302 EFNB3Q15768 340 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 PPP1R32Q7Z5V6 425 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 IQCF6A8MYZ5 107 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 HSD52Q0P140 79 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 EEF1AKMT3Q96AZ1 226 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 C9JCJ5 164 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 UBE2L6O14933 153 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 C1orf162Q8NEQ5 155 aaPredicted RBP9.24□□□□□ -0.93
PBRM1-201ENST00000296302 MRPS18CQ9Y3D5 142 aaKnown RBP9.24□□□□□ -0.93
PBRM1-201ENST00000296302 DNAL4O96015 105 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 ZNF56Q15929 161 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 FAM106AQ4KMX7 169 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 FAM159AQ6UWV7 190 aa9.24□□□□□ -0.93
PBRM1-201ENST00000296302 NHP2Q9NX24 153 aaKnown RBP9.24□□□□□ -0.93
PBRM1-201ENST00000296302 TYMSP04818 313 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 DDB2Q92466 427 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 PILRBQ9UKJ0 227 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 KLRB1Q12918 225 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 PSG7Q13046 419 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 FLVCR1-AS1Q8TAF5 88 aa9.23□□□□□ -0.93
PBRM1-201ENST00000296302 ELOVL5Q9NYP7 299 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms