RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 A0A1B0GWJ7 208 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CEACAM21Q3KPI0 293 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 TDGF1P13385 188 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CCL20P78556 96 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 LEAP2Q969E1 77 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 RPL34P49207 117 aaKnown RBP10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 TMEM144Q7Z5S9 345 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 ZNF114Q8NC26 417 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 PHLDA1Q8WV24 401 aaPredicted RBP10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 TMEM8BA6NDV4 472 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 FAM90A2PQ658T7 463 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 EBLN2Q6P2I7 272 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 MRPL32Q9BYC8 188 aaKnown RBP10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CD1AP06126 327 aa10.02□□□□□ -0.8
SHROOM3-201ENST00000296043 NEUROG3Q9Y4Z2 214 aa10.02□□□□□ -0.8
SHROOM3-201ENST00000296043 NPIPB4C9JG80 1138 aa10.02□□□□□ -0.8
SHROOM3-201ENST00000296043 RNF182Q8N6D2 247 aa10.02□□□□□ -0.8
SHROOM3-201ENST00000296043 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.8
SHROOM3-201ENST00000296043 EML5Q05BV3 1969 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 UCN2Q96RP3 112 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 CDCA3Q99618 268 aaPredicted RBP10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 A0A1W2PQF6 199 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 FAM90A26D6RGX4 464 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 IGHV2-70P01814 119 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 AMELYQ99218 206 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 C9JCJ5 164 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 PIN1P1O15428 100 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 HBDP02042 147 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 TRGV5A0A0B4J1U4 118 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 A0A1B0GUS0 222 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 AGFG2O95081 481 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 LGALS1P09382 135 aaKnown RBP10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 KCNMB1Q16558 191 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 LINC01555Q8NAE3 123 aa10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 INO80CQ6PI98 192 aaPredicted RBP10.02□□□□□ -0.81
SHROOM3-201ENST00000296043 PRRG2O14669 202 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 IGFBP2P18065 325 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 ABHD12Q8N2K0 398 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 HS3ST3B1Q9Y662 390 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 TMEM229AB2RXF0 380 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 CD27P26842 260 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 PLAURQ03405 335 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 SARAFQ96BY9 339 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 PEX11BO96011 259 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 CEACAM3P40198 252 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 PLNP26678 52 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE1Q13065 139 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 IFI27L1Q96BM0 104 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 NDUFA2O43678 99 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 VEGFBP49765 207 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 MDP1Q86V88 176 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 RLFQ13129 1914 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 ITGB1BP1O14713 200 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 TSPAN7P41732 249 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 ABHD17AQ96GS6 310 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 FMC1Q96HJ9 113 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 SIPA1L1O43166 1804 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 TSC2P49815 1807 aa10.01□□□□□ -0.81
SHROOM3-201ENST00000296043 TRAV24A0A0B4J272 114 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 A0A0U1RRA0 63 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 NCR2O95944 276 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 TCF19Q9Y242 345 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 PRB3Q04118 309 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 MIR17HGQ75NE6 70 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 MAFAQ8NHW3 353 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 GNB1LQ9BYB4 327 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 RBMY1BA6NDE4 496 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 RBMY1EA6NEQ0 496 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 OR2H2O95918 312 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 RBMY1DP0C7P1 496 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 RBMY1A1P0DJD3 496 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 RBMY1CP0DJD4 496 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 PLPPR1Q8TBJ4 325 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 MARS2Q96GW9 593 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 IGLV3-16A0A075B6K0 115 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 CD5P06127 495 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 LHX2P50458 406 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 PEAR1Q5VY43 1037 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 TMEM238C9JI98 176 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 MCRIP2Q9BUT9 160 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 MRPL20Q9BYC9 149 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 WBP1LQ9NX94 342 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 SF3B6Q9Y3B4 125 aaKnown RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 LINC00615Q96LM1 132 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 CDKN1BP46527 198 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 FXYD7P58549 80 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 PRSS57Q6UWY2 283 aa10□□□□□ -0.81
SHROOM3-201ENST00000296043 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
SHROOM3-201ENST00000296043 OTOGLQ3ZCN5 2332 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 SELLP14151 372 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 GZMHP20718 246 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 PRDM14Q9GZV8 571 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 YAE1D1Q9NRH1 226 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms