RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 C3orf79P0CE67 100 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
CCNF-201ENST00000293968 TAS2R45P59539 299 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 TMEM178AQ8NBL3 297 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 J3QW42 95 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 AMY1AP04745 511 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 STUMQ69YW2 141 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 ERASQ7Z444 233 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 C1orf174Q8IYL3 243 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 ZNRD1Q9P1U0 126 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 C9JCJ5 164 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 ZNF324O75467 553 aaPredicted RBP12.1□□□□□ -0.47
CCNF-201ENST00000293968 BTF3P20290 206 aaKnown RBP12.1□□□□□ -0.47
CCNF-201ENST00000293968 Q0VG73 95 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 SSBP4Q9BWG4 385 aaPredicted RBP12.1□□□□□ -0.47
CCNF-201ENST00000293968 M0R2Z0 102 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 WISP2O76076 250 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 MT-ND6P03923 174 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 STPG4Q8N801 248 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 OR2V2Q96R30 315 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 DCAF16Q9NXF7 216 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 CDC42EP3Q9UKI2 254 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 CX3CL1P78423 397 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 M0R1B8 84 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 TMEM249Q2WGJ8 235 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 Q6ZT83 130 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 LHFPL4Q7Z7J7 247 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 PRR7Q8TB68 274 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 LSM4Q9Y4Z0 139 aaKnown RBP12.09□□□□□ -0.47
CCNF-201ENST00000293968 HCFC1P51610 2035 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
CCNF-201ENST00000293968 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.47
CCNF-201ENST00000293968 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.47
CCNF-201ENST00000293968 GGTLC3B5MD39 225 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 ACP1P24666 158 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 KLHDC1Q8N7A1 406 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 OR52E5Q8NH55 327 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 ST6GALNAC6Q969X2 333 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 BMPR1BO00238 502 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 HLA-DQA1P01909 254 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 OR10W1Q8NGF6 305 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 C1orf159Q96HA4 380 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 SFXN3Q9BWM7 321 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 TPRP12270 2363 aaKnown RBP12.08□□□□□ -0.48
CCNF-201ENST00000293968 HYPMO75409 117 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 REG1BP48304 166 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 BLNKQ8WV28 456 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 FAM168AQ92567 244 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 IDI2-AS1Q9NZ38 188 aa12.08□□□□□ -0.48
CCNF-201ENST00000293968 C21orf140B9A014 251 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 SFTPCP11686 197 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 AREGP15514 252 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 TRIP6Q15654 476 aaKnown RBP12.07□□□□□ -0.48
CCNF-201ENST00000293968 DUX4L9Q6RFH8 374 aaPredicted RBP12.07□□□□□ -0.48
CCNF-201ENST00000293968 PRSS46E5RG02 174 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 PYYP10082 97 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 MDS2Q8NDY4 140 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 OR2D3Q8NGH3 330 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 ARFGEF3Q5TH69 2177 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 COX7A2P2O60397 106 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 COMPP49747 757 aaPredicted RBP12.07□□□□□ -0.48
CCNF-201ENST00000293968 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 TSKUQ8WUA8 353 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 ZFP30Q9Y2G7 519 aa12.07□□□□□ -0.48
CCNF-201ENST00000293968 A0A1W2PNU3 283 aaPredicted RBP12.06□□□□□ -0.48
CCNF-201ENST00000293968 RPL8P62917 257 aaKnown RBP12.06□□□□□ -0.48
CCNF-201ENST00000293968 MZT1Q08AG7 82 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 SLAQ13239 276 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 COMMD5Q9GZQ3 224 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 ZNF891A8MT65 544 aaPredicted RBP12.06□□□□□ -0.48
CCNF-201ENST00000293968 OR5B3Q8NH48 314 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 C11orf52Q96A22 123 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 OSTCQ9NRP0 149 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 CACNA1GO43497 2377 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 ABCA1O95477 2261 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 IGHV2OR16-5A0A0B4J2B6 119 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 LINC00869P0C866 280 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 C1orf210Q8IVY1 113 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 CHODLQ9H9P2 273 aa12.06□□□□□ -0.48
CCNF-201ENST00000293968 IGKV1-16P04430 117 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 C8orf88P0DMB2 117 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 PMCHL1Q16048 86 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 RTL8BQ17RB0 113 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 C9orf106Q8NAJ2 232 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms