RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 TBC1D26Q86UD7 250 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 OR5B3Q8NH48 314 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 SEC22AQ96IW7 307 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 OVOL2Q9BRP0 275 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 C5orf66Q9H5L9 145 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 SCPEP1Q9HB40 452 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 DAZ1Q9NQZ3 744 aaKnown RBP18.79■□□□□ 0.6
U2AF1-201ENST00000291552 PRNDQ9UKY0 176 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 SPSB3Q6PJ21 355 aa18.78■□□□□ 0.6
U2AF1-201ENST00000291552 ATP6V0BQ99437 205 aa18.78■□□□□ 0.6
U2AF1-201ENST00000291552 SPAG8Q99932 426 aaPredicted RBP18.78■□□□□ 0.6
U2AF1-201ENST00000291552 FAM212BQ9NTI7 297 aaPredicted RBP18.78■□□□□ 0.6
U2AF1-201ENST00000291552 LOC102724200A0A096LPH7 203 aaPredicted RBP18.77■□□□□ 0.6
U2AF1-201ENST00000291552 NDUFA4O00483 81 aa18.77■□□□□ 0.6
U2AF1-201ENST00000291552 HPGDSO60760 199 aa18.77■□□□□ 0.6
U2AF1-201ENST00000291552 RCVRNP35243 200 aa18.77■□□□□ 0.6
U2AF1-201ENST00000291552 TSPAN5P62079 268 aa18.77■□□□□ 0.6
U2AF1-201ENST00000291552 OR2C3Q8N628 320 aa18.77■□□□□ 0.6
U2AF1-201ENST00000291552 CMTM3Q96MX0 182 aa18.77■□□□□ 0.6
U2AF1-201ENST00000291552 TSPAN4O14817 238 aa18.76■□□□□ 0.59
U2AF1-201ENST00000291552 ZNF207O43670 478 aaKnown RBP18.76■□□□□ 0.59
U2AF1-201ENST00000291552 ODF3L2Q3SX64 289 aa18.76■□□□□ 0.59
U2AF1-201ENST00000291552 IL17DQ8TAD2 202 aa18.76■□□□□ 0.59
U2AF1-201ENST00000291552 TSC22D3Q99576 134 aa18.76■□□□□ 0.59
U2AF1-201ENST00000291552 UBQLN2Q9UHD9 624 aa18.76■□□□□ 0.59
U2AF1-201ENST00000291552 M0QYG6 137 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 CTSGP08311 255 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 UCP3P55916 312 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 UBAC2Q8NBM4 344 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 OR1P1Q8NH06 330 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 MRGPRFQ96AM1 343 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 TMEM56Q96MV1 263 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 C20orf24Q9BUV8 137 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 FKBP11Q9NYL4 201 aa18.75■□□□□ 0.59
U2AF1-201ENST00000291552 Q56UQ5 140 aa18.74■□□□□ 0.59
U2AF1-201ENST00000291552 LPCAT3Q6P1A2 487 aa18.74■□□□□ 0.59
U2AF1-201ENST00000291552 SLC38A6Q8IZM9 456 aa18.74■□□□□ 0.59
U2AF1-201ENST00000291552 NAA50Q9GZZ1 169 aaKnown RBP18.74■□□□□ 0.59
U2AF1-201ENST00000291552 SMIM31A0A1B0GVY4 71 aa18.73■□□□□ 0.59
U2AF1-201ENST00000291552 I3L2K1 104 aa18.73■□□□□ 0.59
U2AF1-201ENST00000291552 RNASE12Q5GAN4 147 aaKnown RBP18.73■□□□□ 0.59
U2AF1-201ENST00000291552 K7EMT4 169 aa18.72■□□□□ 0.59
U2AF1-201ENST00000291552 PRCDQ00LT1 54 aa18.72■□□□□ 0.59
U2AF1-201ENST00000291552 IZUMO4Q1ZYL8 232 aa18.72■□□□□ 0.59
U2AF1-201ENST00000291552 ZNF114Q8NC26 417 aa18.72■□□□□ 0.59
U2AF1-201ENST00000291552 SMIM18P0DKX4 95 aa18.71■□□□□ 0.59
U2AF1-201ENST00000291552 H2BFWTQ7Z2G1 175 aa18.71■□□□□ 0.59
U2AF1-201ENST00000291552 LHFPL1Q86WI0 220 aa18.71■□□□□ 0.59
U2AF1-201ENST00000291552 MISP3Q96FF7 219 aa18.71■□□□□ 0.59
U2AF1-201ENST00000291552 C15orf62A8K5M9 175 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 IGKV1-5P01602 117 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 IGHV3-48P01763 117 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 CTSDP07339 412 aaPredicted RBP18.7■□□□□ 0.58
U2AF1-201ENST00000291552 PI3P19957 117 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 S100GP29377 79 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 RND3P61587 244 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 EWSR1Q01844 656 aaKnown RBP eCLIP18.7■□□□□ 0.58
U2AF1-201ENST00000291552 OR4A16Q8NH70 328 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 KLK11Q9UBX7 282 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 SMPXQ9UHP9 88 aa18.7■□□□□ 0.58
U2AF1-201ENST00000291552 JTBO76095 146 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 MT-CO2P00403 227 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 P0C879 139 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 FCGR2BP31994 310 aaPredicted RBP18.69■□□□□ 0.58
U2AF1-201ENST00000291552 RORCP51449 518 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 CTF1Q16619 201 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 OR52I2Q8NH67 350 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 RNF2Q99496 336 aa18.69■□□□□ 0.58
U2AF1-201ENST00000291552 GABARAPO95166 117 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 HSPE1P61604 102 aaKnown RBP18.68■□□□□ 0.58
U2AF1-201ENST00000291552 DEFB135Q30KP9 77 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 SPINK9Q5DT21 86 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 LAMTOR1Q6IAA8 161 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 WFDC3Q8IUB2 231 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 OR10C1Q96KK4 312 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 TP53RKQ96S44 253 aa18.68■□□□□ 0.58
U2AF1-201ENST00000291552 IGHV3-49A0A0A0MS15 119 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 IGHV7-4-1A0A0J9YVY3 117 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 FAM25AB3EWG3 89 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 FAM25CB3EWG5 89 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 FAM25GB3EWG6 89 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 CHEK1O14757 476 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 CD3DP04234 171 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 MFAP4P55083 255 aa18.67■□□□□ 0.58
U2AF1-201ENST00000291552 NXF2Q9GZY0 626 aaKnown RBP18.67■□□□□ 0.58
U2AF1-201ENST00000291552 OR4C46A6NHA9 309 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 NUPL2O15504 423 aaKnown RBP18.66■□□□□ 0.58
U2AF1-201ENST00000291552 PGAM2P15259 253 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 APOC4P55056 127 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 RELQ04864 619 aaPredicted RBP18.66■□□□□ 0.58
U2AF1-201ENST00000291552 Q6ZWC4 215 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 OR4D10Q8NGI6 311 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 TXN2Q99757 166 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 RHPN1-AS1Q9BWJ2 59 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 MTFP1Q9UDX5 166 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 TP53TG1Q9Y2A0 90 aa18.66■□□□□ 0.58
U2AF1-201ENST00000291552 A0A0B4J293 547 aa18.65■□□□□ 0.58
U2AF1-201ENST00000291552 A0A0J9YWU9 116 aa18.65■□□□□ 0.58
U2AF1-201ENST00000291552 PIGPP57054 158 aa18.65■□□□□ 0.58
U2AF1-201ENST00000291552 ZNF124Q15973 351 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms