RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TAGLN2P37802 199 aaKnown RBP6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC35E3Q7Z769 313 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 TCTEX1D1Q8N7M0 179 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 OR11H6Q8NGC7 330 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 OR4X1Q8NH49 305 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 SMIM7Q9BQ49 75 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 ADGRG4Q8IZF6 3080 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 FAM24AA6NFZ4 105 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 MSMBP08118 114 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 FABP4P15090 132 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 PRTN3P24158 256 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 PAX8Q06710 450 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 RCL1Q9Y2P8 373 aaKnown RBP6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 ODF3BA8MYP8 253 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 OR4E1P0C645 316 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 FFAR4Q5NUL3 377 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC25A42Q86VD7 318 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 COMMD7Q86VX2 200 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 OR9G1Q8NH87 305 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 PPP1R1CQ8WVI7 109 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 FAM103A1Q9BTL3 118 aaKnown RBP6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC25A32Q9H2D1 315 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SAV1Q9H4B6 383 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 MT-ND4LP03901 98 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC38A11Q08AI6 406 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 FABP9Q0Z7S8 132 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SMUG1Q53HV7 270 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 LDLRAD3Q86YD5 345 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 Q8N7P7 452 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 Q96MF0 132 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SRD5A3Q9H8P0 318 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 NBPF19A0A087WUL8 3843 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 A0A1W2PPQ1 181 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 ADAP1O75689 374 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 MMP9P14780 707 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 NPFFR1Q9GZQ6 430 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 RAB29O14966 203 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 RANP62826 216 aaKnown RBP6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF66Q6ZN08 573 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF767PQ75MW2 155 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 NHLRC2Q8NBF2 726 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 CHAC2Q8WUX2 184 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 TXN2Q99757 166 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 AGMATQ9BSE5 352 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 CLEC7AQ9BXN2 247 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 IFI27L2Q9H2X8 130 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 MUC4Q99102 2169 aa6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
PTPDC1-201ENST00000288976 SPNP16150 400 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 CCL3L1P16619 93 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF833PQ6ZTB9 187 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 OR5C1Q8NGR4 320 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 RTBDNQ9BSG5 229 aaPredicted RBP6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 FBXL15Q9H469 300 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 TBL2Q9Y4P3 447 aaKnown RBP6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 IGHV2-26A0A0B4J1V2 119 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 HOXB4P17483 251 aaPredicted RBP6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 C5orf17Q8NAS9 161 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM186Q96B77 213 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 METTL26Q96S19 204 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 C5orf66Q9H5L9 145 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM140Q9NV12 185 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 CENPEQ02224 2701 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 C3orf85A0A1B0GTC6 90 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 OOSP1A8MZH6 123 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 E5RGE8 158 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM262E9PQX1 116 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 IGLV2-14P01704 120 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 IGHV4-31P0DP07 118 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 NPY1RP25929 384 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 TCL1AP56279 114 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 MINOS1Q5TGZ0 78 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 CYB5R2Q6BCY4 276 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 VKORC1L1Q8N0U8 176 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 MINOS1-NBL1R4GNA1 71 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 ITPR3Q14573 2671 aa6.86□□□□□ -1.31
PTPDC1-201ENST00000288976 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 C7orf66A4D0T2 115 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 GATCO43716 136 aaKnown RBP6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 FXYD3Q14802 87 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 MIDNQ504T8 468 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM128Q5BJH2 165 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC16A13Q7RTY0 426 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 VMO1Q7Z5L0 202 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 GNPNAT1Q96EK6 184 aaPredicted RBP6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 C20orf202A1L168 122 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TRAPPC2P0DI81 140 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TRAPPC2BP0DI82 140 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms