RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CMTM3Q96MX0 182 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 NDUFA4L2Q9NRX3 87 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 NSG2Q9Y328 171 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 A0A0J9YWU9 116 aa10.46□□□□□ -0.73
TPM1-202ENST00000288398 ZNF207O43670 478 aaKnown RBP10.46□□□□□ -0.73
TPM1-202ENST00000288398 LY6G6CO95867 125 aa10.46□□□□□ -0.73
TPM1-202ENST00000288398 EIF4EP06730 217 aaKnown RBP10.46□□□□□ -0.73
TPM1-202ENST00000288398 CMC4P56277 68 aaPredicted RBP10.46□□□□□ -0.73
TPM1-202ENST00000288398 PHLDA2Q53GA4 152 aa10.46□□□□□ -0.73
TPM1-202ENST00000288398 H2BFWTQ7Z2G1 175 aa10.46□□□□□ -0.73
TPM1-202ENST00000288398 LYG2Q86SG7 212 aa10.46□□□□□ -0.73
TPM1-202ENST00000288398 MISP3Q96FF7 219 aa10.46□□□□□ -0.73
TPM1-202ENST00000288398 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
TPM1-202ENST00000288398 IGHV3OR16-8A0A075B7F1 116 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 KIR2DL5BA0A0G2JN68 375 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 KIR2DL5BA0A0G2JPC4 375 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 C15orf62A8K5M9 175 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 K7EMT4 169 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 RPL35AP18077 110 aaKnown RBP10.45□□□□□ -0.74
TPM1-202ENST00000288398 HLA-DMAP28067 261 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 HRH1P35367 487 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 MFAP4P55083 255 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 LSM3P62310 102 aaKnown RBP10.45□□□□□ -0.74
TPM1-202ENST00000288398 KIR2DL5AQ8N109 375 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 CADM3Q8N126 398 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 KIR2DL5BQ8NHK3 375 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 SLC25A46Q96AG3 418 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 GALNT14Q96FL9 552 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 LYSTQ99698 3801 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 CHRDL1Q9BU40 450 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 FXYD6Q9H0Q3 95 aa10.45□□□□□ -0.74
TPM1-202ENST00000288398 C15orf61A6NNL5 157 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
TPM1-202ENST00000288398 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 TNFRSF9Q07011 255 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 WFDC3Q8IUB2 231 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 TMEM116Q8NCL8 245 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 ANAPC10Q9UM13 185 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 DNAH1Q9P2D7 4330 aa10.44□□□□□ -0.74
TPM1-202ENST00000288398 K7EIM0 57 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 GNG7O60262 68 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 NAT1P18440 290 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 RPS19P39019 145 aaKnown RBP10.43□□□□□ -0.74
TPM1-202ENST00000288398 TFPI2P48307 235 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 MFAP2P55001 183 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 ERHP84090 104 aaKnown RBP10.43□□□□□ -0.74
TPM1-202ENST00000288398 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 TBC1D26Q86UD7 250 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 PINX1Q96BK5 328 aaKnown RBP10.43□□□□□ -0.74
TPM1-202ENST00000288398 TXN2Q99757 166 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 GINS3Q9BRX5 216 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 SCPEP1Q9HB40 452 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
TPM1-202ENST00000288398 TMEM14BQ9NUH8 114 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 COMMD3Q9UBI1 195 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 SMPXQ9UHP9 88 aa10.43□□□□□ -0.74
TPM1-202ENST00000288398 IGKV3-7A0A075B6H7 116 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 A0A087WXM4 84 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 IGHV7-4-1A0A0J9YVY3 117 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 ATG12O94817 140 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 RCVRNP35243 200 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 ADMP35318 185 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 TGFBR1P36897 503 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 CEMP1Q6PRD7 247 aaPredicted RBP10.42□□□□□ -0.74
TPM1-202ENST00000288398 SNX29P2Q8IUI4 249 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 RNF183Q96D59 192 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
TPM1-202ENST00000288398 TRAV14DV4A0A0A6YYC5 116 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 SCGB2A1O75556 95 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 MT-CO2P00403 227 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 CD5P06127 495 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 CTSGP08311 255 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 PGAM2P15259 253 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 SNCAP37840 140 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 SLC35G3Q8N808 338 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 RNF2Q99496 336 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
TPM1-202ENST00000288398 IGHV3-49A0A0A0MS15 119 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 MPTX1A8MV57 137 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 DNASE2O00115 360 aaPredicted RBP10.4□□□□□ -0.74
TPM1-202ENST00000288398 CHEK1O14757 476 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 TNFAIP8O95379 198 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 APOA1P02647 267 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 ATF4P18848 351 aaPredicted RBP10.4□□□□□ -0.74
TPM1-202ENST00000288398 NPBWR1P48145 328 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 AKR1C2P52895 323 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 HSPE1P61604 102 aaKnown RBP10.4□□□□□ -0.74
TPM1-202ENST00000288398 RPL11P62913 178 aaKnown RBP10.4□□□□□ -0.74
TPM1-202ENST00000288398 PRCDQ00LT1 54 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 LYSMD2Q8IV50 215 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 APRG1Q8IVJ8 170 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 DUSP18Q8NEJ0 188 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 GPX8Q8TED1 209 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 MRGPRFQ96AM1 343 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 YIPF6Q96EC8 236 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 CSTL1Q9H114 145 aa10.4□□□□□ -0.74
TPM1-202ENST00000288398 ENY2Q9NPA8 101 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms