RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 AKR1C4P17516 323 aa19.24■□□□□ 0.67
PDF-201ENST00000288022 HSPE1P61604 102 aaKnown RBP19.24■□□□□ 0.67
PDF-201ENST00000288022 PRCDQ00LT1 54 aa19.24■□□□□ 0.67
PDF-201ENST00000288022 TRIQKQ629K1 86 aa19.24■□□□□ 0.67
PDF-201ENST00000288022 CCDC140Q96MF4 163 aa19.24■□□□□ 0.67
PDF-201ENST00000288022 PRR25Q96S07 402 aa19.24■□□□□ 0.67
PDF-201ENST00000288022 KCNIP3Q9Y2W7 256 aa19.24■□□□□ 0.67
PDF-201ENST00000288022 TRBV7-1A0A0A6YYK4 115 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 P0C879 139 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 ARL3P36405 182 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 SPINK9Q5DT21 86 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 TMEM268Q5VZI3 342 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 DEDD2Q8WXF8 326 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 RBPMSQ93062 196 aaKnown RBP19.23■□□□□ 0.67
PDF-201ENST00000288022 TMEM230Q96A57 120 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 PDCD10Q9BUL8 212 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 PLEKHA3Q9HB20 300 aa19.23■□□□□ 0.67
PDF-201ENST00000288022 ZNF256Q9Y2P7 627 aaPredicted RBP19.23■□□□□ 0.67
PDF-201ENST00000288022 A0A0B4J293 547 aa19.22■□□□□ 0.67
PDF-201ENST00000288022 GGCTO75223 188 aaKnown RBP19.22■□□□□ 0.67
PDF-201ENST00000288022 IFNA17P01571 189 aa19.22■□□□□ 0.67
PDF-201ENST00000288022 HLA-AP01891 365 aaKnown RBP19.22■□□□□ 0.67
PDF-201ENST00000288022 SELENOHQ8IZQ5 122 aaKnown RBP19.22■□□□□ 0.67
PDF-201ENST00000288022 SLC35G3Q8N808 338 aa19.22■□□□□ 0.67
PDF-201ENST00000288022 LHFPL5Q8TAF8 219 aa19.22■□□□□ 0.67
PDF-201ENST00000288022 A0A0G2JRQ6 117 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 ST8SIA3O43173 380 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 OR2C1O95371 312 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 BAK1Q16611 211 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 TMED4Q7Z7H5 227 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 HAPLN4Q86UW8 402 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 FAM219AQ8IW50 185 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 OR1L6Q8NGR2 347 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 PEMTQ9UBM1 199 aa19.21■□□□□ 0.67
PDF-201ENST00000288022 MFAP2P55001 183 aa19.2■□□□□ 0.66
PDF-201ENST00000288022 ERHP84090 104 aaKnown RBP19.2■□□□□ 0.66
PDF-201ENST00000288022 OR2C3Q8N628 320 aa19.2■□□□□ 0.66
PDF-201ENST00000288022 GALNT14Q96FL9 552 aa19.2■□□□□ 0.66
PDF-201ENST00000288022 ZC4H2Q9NQZ6 224 aa19.2■□□□□ 0.66
PDF-201ENST00000288022 PRR13Q9NZ81 148 aa19.2■□□□□ 0.66
PDF-201ENST00000288022 IGHV3-21A0A0B4J1V1 117 aa19.19■□□□□ 0.66
PDF-201ENST00000288022 CLEC3BP05452 202 aa19.19■□□□□ 0.66
PDF-201ENST00000288022 GPR183P32249 361 aa19.19■□□□□ 0.66
PDF-201ENST00000288022 OR1P1Q8NH06 330 aa19.19■□□□□ 0.66
PDF-201ENST00000288022 ZNF502Q8TBZ5 544 aa19.19■□□□□ 0.66
PDF-201ENST00000288022 VN1R17PQ8TDU5 208 aa19.19■□□□□ 0.66
PDF-201ENST00000288022 SLC25A21Q9BQT8 299 aaPredicted RBP19.19■□□□□ 0.66
PDF-201ENST00000288022 LINC00854A0A1B0GVQ3 168 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 ANXA3P12429 323 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 SPNP16150 400 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 TMEM187Q14656 261 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 MISP3Q96FF7 219 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 ENY2Q9NPA8 101 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 TMEM56-RWDD3S4R434 201 aa19.18■□□□□ 0.66
PDF-201ENST00000288022 HOXA1P49639 335 aaPredicted RBP19.17■□□□□ 0.66
PDF-201ENST00000288022 DCTN2Q13561 401 aaKnown RBP19.17■□□□□ 0.66
PDF-201ENST00000288022 IL34Q6ZMJ4 242 aa19.17■□□□□ 0.66
PDF-201ENST00000288022 Q6ZRM9 215 aa19.17■□□□□ 0.66
PDF-201ENST00000288022 IL22RA2Q969J5 263 aa19.17■□□□□ 0.66
PDF-201ENST00000288022 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.17■□□□□ 0.66
PDF-201ENST00000288022 CACNG5Q9UF02 275 aa19.17■□□□□ 0.66
PDF-201ENST00000288022 DNAH3Q8TD57 4116 aa19.16■□□□□ 0.66
PDF-201ENST00000288022 IGLV1-51P01701 117 aa19.16■□□□□ 0.66
PDF-201ENST00000288022 CSN3P07498 182 aa19.16■□□□□ 0.66
PDF-201ENST00000288022 SNCAP37840 140 aa19.16■□□□□ 0.66
PDF-201ENST00000288022 SUPT4H1P63272 117 aaKnown RBP19.16■□□□□ 0.66
PDF-201ENST00000288022 PLET1Q6UQ28 207 aa19.16■□□□□ 0.66
PDF-201ENST00000288022 GPR146Q96CH1 333 aa19.16■□□□□ 0.66
PDF-201ENST00000288022 SDHCQ99643 169 aaPredicted RBP19.16■□□□□ 0.66
PDF-201ENST00000288022 ZNF320A2RRD8 509 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 NAP1L6A6NFF2 107 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 CCR6P51684 374 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 SRPXP78539 464 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 FAM106AQ4KMX7 169 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 GPHB5Q86YW7 130 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 UBAC2Q8NBM4 344 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 ZNF114Q8NC26 417 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 SCARB1Q8WTV0 552 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 C21orf62Q9NYP8 219 aa19.15■□□□□ 0.66
PDF-201ENST00000288022 OR2T8A6NH00 312 aa19.14■□□□□ 0.65
PDF-201ENST00000288022 K7EIM0 57 aa19.14■□□□□ 0.65
PDF-201ENST00000288022 VAMP1P23763 118 aa19.14■□□□□ 0.65
PDF-201ENST00000288022 RBMS2Q15434 407 aaKnown RBP19.14■□□□□ 0.65
PDF-201ENST00000288022 Q56UQ5 140 aa19.14■□□□□ 0.65
PDF-201ENST00000288022 TMEM128Q5BJH2 165 aa19.14■□□□□ 0.65
PDF-201ENST00000288022 LGI3Q8N145 548 aa19.14■□□□□ 0.65
PDF-201ENST00000288022 PRKDCP78527 4128 aaKnown RBP19.13■□□□□ 0.65
PDF-201ENST00000288022 CENPXA8MT69 81 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 LGALS9O00182 355 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 TGOLN2O43493 480 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 IL7P13232 177 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 GP9P14770 177 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 SPCS3P61009 180 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 CENPSQ8N2Z9 138 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 PINX1Q96BK5 328 aaKnown RBP19.13■□□□□ 0.65
PDF-201ENST00000288022 SIGLEC8Q9NYZ4 499 aa19.13■□□□□ 0.65
PDF-201ENST00000288022 A0A0B4J2A0 478 aa19.12■□□□□ 0.65
PDF-201ENST00000288022 IGHV3-35A0A0C4DH35 117 aa19.12■□□□□ 0.65
PDF-201ENST00000288022 LYZL2Q7Z4W2 148 aa19.12■□□□□ 0.65
PDF-201ENST00000288022 BSCL2Q96G97 398 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms