RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 AKAP14Q86UN6 197 aa17.08■□□□□ 0.32
PDLIM3-203ENST00000284771 LURAP1LQ8IV03 231 aa17.08■□□□□ 0.32
PDLIM3-203ENST00000284771 P2RX4Q99571 388 aa17.08■□□□□ 0.32
PDLIM3-203ENST00000284771 HIPK2Q9H2X6 1198 aa17.08■□□□□ 0.32
PDLIM3-203ENST00000284771 NPIPB5A8MRT5 1133 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 H3BP45 60 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 FBXO24O75426 580 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 NDUFA7O95182 113 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 PRH1P02810 166 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 ERHP84090 104 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 HSD17B13Q7Z5P4 300 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 ZNF329Q86UD4 541 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 SMIM8Q96KF7 97 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 RAB40CQ96S21 281 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 WNT10AQ9GZT5 417 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 ENY2Q9NPA8 101 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 RNASE2P10153 161 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 PRSS54Q6PEW0 395 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 TMEM68Q96MH6 324 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 ZFP57Q9NU63 452 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 MBD2Q9UBB5 411 aa17.07■□□□□ 0.32
PDLIM3-203ENST00000284771 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-203ENST00000284771 CIB3Q96Q77 187 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-203ENST00000284771 OR4C12Q96R67 309 aa17.06■□□□□ 0.32
PDLIM3-203ENST00000284771 PSENENQ9NZ42 101 aa17.06■□□□□ 0.32
PDLIM3-203ENST00000284771 C15orf62A8K5M9 175 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 HKR1P10072 659 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 LYL1P12980 280 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 SPANXN5Q5MJ07 72 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 TCTE3Q8IZS6 198 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 ZNF114Q8NC26 417 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 SLC24A4Q8NFF2 622 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 OR11H4Q8NGC9 324 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 FAM110DQ8TAY7 271 aaPredicted RBP17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 FANCD2OSQ96PS1 177 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 F11RQ9Y624 299 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 U3KQ87 197 aa17.05■□□□□ 0.32
PDLIM3-203ENST00000284771 RLN2P04090 185 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 SNCAP37840 140 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 TAS2R30P59541 319 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 FAM24AA6NFZ4 105 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 IFNA10P01566 189 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 IGLV1-40P01703 118 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 MDKP21741 143 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 HTR2BP41595 481 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 FGL1Q08830 312 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 PVRIGQ6DKI7 326 aa17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 WIPF2Q8TF74 440 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 LYRM2Q9NU23 88 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-203ENST00000284771 FBN1P35555 2871 aaKnown RBP17.03■□□□□ 0.32
PDLIM3-203ENST00000284771 E5RGE8 158 aa17.03■□□□□ 0.32
PDLIM3-203ENST00000284771 C2orf83Q53S99 150 aa17.03■□□□□ 0.32
PDLIM3-203ENST00000284771 OR1P1Q8NH06 330 aa17.03■□□□□ 0.32
PDLIM3-203ENST00000284771 THAP6Q8TBB0 222 aa17.03■□□□□ 0.32
PDLIM3-203ENST00000284771 KLK15Q9H2R5 256 aa17.03■□□□□ 0.32
PDLIM3-203ENST00000284771 PMS2P5A8MQ11 134 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 L7N2F9 121 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 TSC22D2O75157 780 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 IGHG4P01861 327 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 PET100P0DJ07 73 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 PVALBP20472 110 aaPredicted RBP17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 NPY1RP25929 384 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 VAMP2P63027 116 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 TMEM14EPQ6UXP3 125 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 LCNL1Q6ZST4 164 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 MRPL41Q8IXM3 137 aaKnown RBP17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 OR4F5Q8NH21 305 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 MS4A10Q96PG2 267 aa17.02■□□□□ 0.32
PDLIM3-203ENST00000284771 IGLV11-55A0A075B6I3 123 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 SLC25A4P12235 298 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 DEFA4P12838 97 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 CAV2P51636 162 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 RPL23AP62750 156 aaKnown RBP17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 DEFA5Q01523 94 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 KLK9Q2XQG4 91 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 KRTAP24-1Q3LI83 254 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 CENPVQ7Z7K6 275 aaPredicted RBP17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 TMEM252Q8N6L7 170 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 GON7Q9BXV9 100 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 KLK9Q9UKQ9 250 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 STRAPQ9Y3F4 350 aaKnown RBP17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 TRBV9A0A0B4J1U6 114 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 IGSF23A1L1A6 192 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 CLPSL1A2RUU4 121 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 PSMB11A5LHX3 300 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 LY86O95711 162 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 PSMB8P28062 276 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 P2RY1P47900 373 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 MLANAQ16655 118 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 SLC25A24Q6NUK1 477 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 KLHDC1Q8N7A1 406 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 DCUN1D4Q92564 292 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 ZNF355PQ9NSJ1 428 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 RNF114Q9Y508 228 aa17.01■□□□□ 0.31
PDLIM3-203ENST00000284771 METTL15P1P0C7V9 234 aa17■□□□□ 0.31
PDLIM3-203ENST00000284771 PROK1P58294 105 aa17■□□□□ 0.31
PDLIM3-203ENST00000284771 ARL16Q0P5N6 197 aa17■□□□□ 0.31
PDLIM3-203ENST00000284771 HAPLN4Q86UW8 402 aa17■□□□□ 0.31
PDLIM3-203ENST00000284771 PAIP2BQ9ULR5 123 aaKnown RBP17■□□□□ 0.31
PDLIM3-203ENST00000284771 PRSS46E5RG02 174 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms