RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 B9A039 149 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ZG16O60844 167 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 PPBPP02775 128 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
NIPBL-201ENST00000282516 TIMM23BQ5SRD1 257 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF721Q8TF20 911 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 C5orf66Q9H5L9 145 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 LAMTOR3Q9UHA4 124 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 NAV3Q8IVL0 2385 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 TRBV5-5A0A0J9YX44 114 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 CELA2BP08218 269 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-201ENST00000282516 GAGE13Q4V321 117 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 RPRMQ9NS64 109 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 TRGV11A0A075B6L2 103 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 KIAA0040Q15053 153 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 ASCL4Q6XD76 172 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 NR2C2APQ86WQ0 139 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 NRXN3Q9Y4C0 1643 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 SRSF1Q07955 248 aaKnown RBP eCLIP7.44□□□□□ -1.22
NIPBL-201ENST00000282516 FUT5Q11128 374 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 TMEM167AQ8TBQ9 72 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 C21orf62Q9NYP8 219 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 A0A087WWC5 75 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 RALGAPA2Q2PPJ7 1873 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 PTP4A3O75365 173 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 CTSSP25774 331 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 PSG4Q00888 419 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 UBE2DNLQ8IWF7 75 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-201ENST00000282516 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 J3QW42 95 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 FAM208BQ5VWN6 2430 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 TRAV8-1A0A0A6YYK1 113 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 SNAI2O43623 268 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 Q96M66 194 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
NIPBL-201ENST00000282516 SPINT1O43278 529 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 WDYHV1Q96HA8 205 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 KLHDC2Q9Y2U9 406 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 HBDP02042 147 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 IL11P20809 199 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 HIST1H4AP62805 103 aaKnown RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 SCARF2Q96GP6 870 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 DOCK4Q8N1I0 1966 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 TRAV9-2A0A087WT02 112 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 CISD3P0C7P0 127 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 OSR1Q8TAX0 266 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 FGF11Q92914 225 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 NBEAP1P0C6P0 100 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 NANOS3P60323 173 aaKnown RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 NPIPB3Q92617 1050 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF48Q96MX3 618 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 HRKO00198 91 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 OTORQ9NRC9 128 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 TSC2P49815 1807 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 IGHV1-69-2A0A0G2JMI3 117 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 NPDC1Q9NQX5 325 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-201ENST00000282516 LAMTOR2Q9Y2Q5 125 aa7.43□□□□□ -1.22
NIPBL-201ENST00000282516 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 HSD52Q0P140 79 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 RTN4RL2Q86UN3 420 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 C1orf162Q8NEQ5 155 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 LOXL4Q96JB6 756 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 IFI27L2Q9H2X8 130 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 DLL3Q9NYJ7 618 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 WDR81Q562E7 1941 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 IGHV3OR16-13A0A075B7E8 117 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 IGHV3-74A0A0B4J1X5 117 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 TM4SF5O14894 197 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 CD7P09564 240 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 TMEM91Q6ZNR0 172 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 GTSCR1Q86UQ5 136 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 POC1AQ8NBT0 407 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF385AQ96PM9 386 aaKnown RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 Q9H3A6 140 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 FAM60AQ9NP50 221 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 SNAI3Q3KNW1 292 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 CACNG8Q8WXS5 425 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 SLC50A1Q9BRV3 221 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 CHTOPQ9Y3Y2 248 aaKnown RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 GFRA3O60609 400 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 EGR1P18146 543 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF826PQ6ZT77 177 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 ZPLD1Q8TCW7 415 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 TMEM54Q969K7 222 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 TRPM7Q96QT4 1865 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 NTN1O95631 604 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 RIPPLY3P57055 190 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 SSBP2P81877 361 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 C1orf100Q5SVJ3 147 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 NRN1Q9NPD7 142 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 GSN-AS1Q9NRJ2 163 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms