RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SDSLQ96GA7 329 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 RHOVQ96L33 236 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 ENY2Q9NPA8 101 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 ZNF257Q9Y2Q1 563 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 A0A087X0M5 115 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 A0A1B0GX30 115 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 C9JCJ5 164 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-201ENST00000277198 AREGP15514 252 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 YPEL3P61236 119 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-201ENST00000277198 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 SLC25A10Q9UBX3 287 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-201ENST00000277198 PRNDQ9UKY0 176 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 TRAPPC1Q9Y5R8 145 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 TRGV10A0A0A0MS01 117 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 A0A0U1RQK1 487 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF320A2RRD8 509 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 GCHFRP30047 84 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 EFNB3Q15768 340 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 CT45A1Q5HYN5 189 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 OR4A47Q6IF82 309 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 GBGT1Q8N5D6 347 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 CT45A3Q8NHU0 189 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 SGMS2Q8NHU3 365 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 C1orf159Q96HA4 380 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 UHRF2Q96PU4 802 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 ELOVL5Q9NYP7 299 aa10.58□□□□□ -0.72
C9orf3-201ENST00000277198 SAA2-SAA4A0A096LPE2 208 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 SAA2P0DJI9 122 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-201ENST00000277198 TIMP3P35625 211 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 PRR20EP86478 221 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 PRR20CP86479 221 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 PRR20DP86480 221 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 PRR20BP86481 221 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 PRR20AP86496 221 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 IQCJQ1A5X6 159 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 MSMPQ1L6U9 139 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 ARSJQ5FYB0 599 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-201ENST00000277198 TEX38Q6PEX7 206 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 LRP11Q86VZ4 500 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 STPG3Q8N7X2 389 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 BEND2Q8NDZ0 799 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 OR10G8Q8NGN5 311 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 NEUROG1Q92886 237 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 DERL1Q9BUN8 251 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 C19orf24Q9BVV8 132 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 RNF7Q9UBF6 113 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 A8MWP6 167 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 BMP5P22003 454 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 SELENOVP59797 346 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 MRPS11P82912 194 aaKnown RBP10.57□□□□□ -0.72
C9orf3-201ENST00000277198 PNKDQ8N490 385 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF439Q8NDP4 499 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 OR5T1Q8NG75 326 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 FKBP11Q9NYL4 201 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 IL19Q9UHD0 177 aa10.57□□□□□ -0.72
C9orf3-201ENST00000277198 TRBV20OR9-2A0A075B6H5 130 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 IGHV3OR15-7A0A075B7D8 119 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 A8MXE2 369 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 SLC31A2O15432 143 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 CEACAM8P31997 349 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF83P51522 516 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 CLEC12BQ2HXU8 276 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 STUMQ69YW2 141 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 IDI2-AS1Q9NZ38 188 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 PDZD2O15018 2839 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 HCFC1P51610 2035 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 SCO2A0A1W2PP80 73 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 M0R1B8 84 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 CA2P00918 260 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 COX6B1P14854 86 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 IGFBP2P18065 325 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 SSTP61278 116 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 RPL31P62899 125 aaKnown RBP10.56□□□□□ -0.72
C9orf3-201ENST00000277198 PRCDQ00LT1 54 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 C1orf229Q6ZS94 237 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 ITLN1Q8WWA0 313 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 SLC35E1Q96K37 410 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 SEPSECSQ9HD40 501 aaKnown RBP10.56□□□□□ -0.72
C9orf3-201ENST00000277198 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
C9orf3-201ENST00000277198 SPRY3O43610 288 aa10.55□□□□□ -0.72
C9orf3-201ENST00000277198 KRTAP10-9P60411 292 aa10.55□□□□□ -0.72
C9orf3-201ENST00000277198 SELENOTP62341 195 aa10.55□□□□□ -0.72
C9orf3-201ENST00000277198 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
C9orf3-201ENST00000277198 MRPL41Q8IXM3 137 aaKnown RBP10.55□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF664Q8N3J9 261 aa10.55□□□□□ -0.72
C9orf3-201ENST00000277198 SSMEM1Q8WWF3 244 aa10.55□□□□□ -0.72
C9orf3-201ENST00000277198 SLC45A2Q9UMX9 530 aa10.55□□□□□ -0.72
C9orf3-201ENST00000277198 YTHDF2Q9Y5A9 579 aaKnown RBP10.55□□□□□ -0.72
C9orf3-201ENST00000277198 OR51B2Q9Y5P1 312 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms