RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RBMY1A1P0DJD3 496 aaKnown RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 RBMY1CP0DJD4 496 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 CACNG7P62955 275 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 SNAI3Q3KNW1 292 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TNFRSF18Q9Y5U5 241 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 VWA8A3KMH1 1905 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 PPIAL4CA0A0B4J2A2 164 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 PPIAL4GP0DN37 164 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TUBA4BQ9H853 241 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 ACP7Q6ZNF0 438 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 C1orf162Q8NEQ5 155 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 KLF4O43474 513 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 PDLIM4P50479 330 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 FAM74A4Q5TZK3 123 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 ORMDL3Q8N138 153 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 IFI27L2Q9H2X8 130 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 CGB1A6NKQ9 187 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM160Q9NX00 188 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 FOXI3A8MTJ6 420 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM50AO95807 157 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 GSN-AS1Q9NRJ2 163 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 PGPEP1Q9NXJ5 209 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 FRMPD3Q5JV73 1810 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 DRAM1Q8N682 238 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 HIVEP3Q5T1R4 2406 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 AGRNO00468 2067 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 COX6A1P12074 109 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 IL11P20809 199 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 EML6Q6ZMW3 1958 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 TCF20Q9UGU0 1960 aaKnown RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 A0A1W2PQF6 199 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 PRB4P10163 310 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 CCL19Q99731 98 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 ZNHIT1O43257 154 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SLC25A2Q9BXI2 301 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 A0A1B0GWB2 263 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 MOSPD3O75425 235 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 FOXH1O75593 365 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SP7Q8TDD2 431 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SCARF2Q96GP6 870 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SPCS1Q9Y6A9 102 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 PRB1P04280 392 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SRSF5Q13243 272 aaKnown RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 ACSF3Q4G176 576 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 ABHD12Q8N2K0 398 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 ASCL2Q99929 193 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 LEPP41159 167 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 SLC22A18ASQ8N1D0 253 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 OR2K2Q8NGT1 345 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 FGF11Q92914 225 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 CNTFRP26992 372 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 STARD6P59095 220 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 FNDC1Q4ZHG4 1894 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-201ENST00000273317 C5orf30Q96GV9 206 aa6.78□□□□□ -1.32
LIMD1-201ENST00000273317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-201ENST00000273317 THY1P04216 161 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 GPR183P32249 361 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 TFPI2P48307 235 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 OR11H4Q8NGC9 324 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 FHITP49789 147 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 PRB3Q04118 309 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-201ENST00000273317 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 TMEM74BQ9NUR3 256 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 TICRRQ7Z2Z1 1910 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 WDR90Q96KV7 1748 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 PGPEP1LA6NFU8 196 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 TEX45Q8NA69 505 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 NRTNQ99748 197 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 PPBPP02775 128 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 GDF15Q99988 308 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 SRXN1Q9BYN0 137 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 C2orf16Q68DN1 1984 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 USF3Q68DE3 2245 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 APOHP02749 345 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-201ENST00000273317 IFITM2Q01629 132 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 Q6ZT83 130 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 DPH3Q96FX2 82 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 EIF4EBP2Q13542 120 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-201ENST00000273317 PRDM13Q9H4Q3 707 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 SEMA5BQ9P283 1151 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 UCP1P25874 307 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 CFAP161Q6P656 301 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 DCTN5Q9BTE1 182 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 IGKV1D-42A0A075B6H8 117 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 SRP19P09132 144 aaKnown RBP6.77□□□□□ -1.33
LIMD1-201ENST00000273317 OR10J3Q5JRS4 329 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 FAM57AQ8TBR7 257 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 IGHV4-39P01824 125 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 REG1AP05451 166 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 MPZP25189 248 aa6.77□□□□□ -1.33
LIMD1-201ENST00000273317 SLC25A20O43772 301 aa6.76□□□□□ -1.33
LIMD1-201ENST00000273317 CD69Q07108 199 aa6.76□□□□□ -1.33
LIMD1-201ENST00000273317 GTF3AQ92664 365 aaKnown RBP6.76□□□□□ -1.33
LIMD1-201ENST00000273317 CHCHD1Q96BP2 118 aaKnown RBP6.76□□□□□ -1.33
LIMD1-201ENST00000273317 AMELYQ99218 206 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms