RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 TGFAP01135 160 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 C8orf88P0DMB2 117 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 AZU1P20160 251 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 TMEM160Q9NX00 188 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 SNRPCP09234 159 aaKnown RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 GPX4P36969 197 aaPredicted RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 NHP2Q9NX24 153 aaKnown RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 PATE4P0C8F1 98 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 CSRP2Q16527 193 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 RNF166Q96A37 237 aaPredicted RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 CD160O95971 181 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 EWSR1Q01844 656 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 ZIC4Q8N9L1 334 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 PRSS27Q9BQR3 290 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 TMEFF2Q9UIK5 374 aaPredicted RBP11.35□□□□□ -0.59
PRDM16-201ENST00000270722 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
PRDM16-201ENST00000270722 DUSP14O95147 198 aaKnown RBP11.34□□□□□ -0.59
PRDM16-201ENST00000270722 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
PRDM16-201ENST00000270722 SMIM20Q8N5G0 67 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 NPIPB4C9JG80 1138 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 ITLN1Q8WWA0 313 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 SEMA5BQ9P283 1151 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 GAGE12HA6NDE8 117 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 OR13A1Q8NGR1 328 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 V9GYH0 126 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 PSG6Q00889 435 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 TRAV8-6A0A0B4J262 113 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 VWC2LB2RUY7 222 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 OSR1Q8TAX0 266 aaPredicted RBP11.34□□□□□ -0.59
PRDM16-201ENST00000270722 WDYHV1Q96HA8 205 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 RPRMQ9NS64 109 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 TTC28Q96AY4 2481 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 IGKV3-11P04433 115 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 BIVMQ86UB2 503 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 PPDPFLQ8WWR9 84 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 TDGF1P13385 188 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 TMEM54Q969K7 222 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 CHCHD1Q96BP2 118 aaKnown RBP11.34□□□□□ -0.59
PRDM16-201ENST00000270722 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
PRDM16-201ENST00000270722 ZNF660Q6AZW8 331 aaPredicted RBP11.33□□□□□ -0.59
PRDM16-201ENST00000270722 FXYD1O00168 92 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 PSG1P11464 419 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 SRD5A1P18405 259 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 RHOGP84095 191 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 FXYD3Q14802 87 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 FAM90A1Q86YD7 464 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 RNASEH2CQ8TDP1 164 aaKnown RBP11.33□□□□□ -0.6
PRDM16-201ENST00000270722 OR2H2O95918 312 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
PRDM16-201ENST00000270722 DMRTC1Q5HYR2 192 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 Q6ZT83 130 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 FAM60AQ9NP50 221 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 OTPQ5XKR4 325 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM179BQ7Z7N9 219 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 NPIPB13A6NJU9 1138 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 A6NNC1 897 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 SPSB4Q96A44 273 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 ABCA3Q99758 1704 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 NDUFS6O75380 124 aaKnown RBP11.33□□□□□ -0.6
PRDM16-201ENST00000270722 DANCRP0C864 163 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 APELAP0DMC3 54 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 ADAMTSL5Q6ZMM2 481 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 MYEOVQ96EZ4 313 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 CFHR5Q9BXR6 569 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 R3HDMLQ9H3Y0 253 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 ADAMTSL3P82987 1691 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 LIMS1P48059 325 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
PRDM16-201ENST00000270722 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 RAE1P78406 368 aaKnown RBP11.32□□□□□ -0.6
PRDM16-201ENST00000270722 RND2P52198 227 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 FSTP19883 344 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 ITLN2Q8WWU7 325 aaPredicted RBP11.32□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM74BQ9NUR3 256 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 CBLN1P23435 193 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 DRAM1Q8N682 238 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 FAM181AQ8N9Y4 354 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 SMPXQ9UHP9 88 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
PRDM16-201ENST00000270722 PRSS41Q7RTY9 318 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
PRDM16-201ENST00000270722 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
PRDM16-201ENST00000270722 SIRT4Q9Y6E7 314 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms