RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 KLHDC1Q8N7A1 406 aa11.76□□□□□ -0.53
TNFRSF11A-201ENST00000269485 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
TNFRSF11A-201ENST00000269485 RPRMQ9NS64 109 aa11.76□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ZNF107Q9UII5 783 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF11A-201ENST00000269485 CD40P25942 277 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 RPL31P62899 125 aaKnown RBP11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 RBPJQ06330 500 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 IL13RA2Q14627 380 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 COLCA1Q6ZS62 124 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 S1PR3Q99500 378 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 CISD1Q9NZ45 108 aaKnown RBP11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TRAV3A0A0B4J244 114 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 VDAC1P21796 283 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 CBLN1P23435 193 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 RPL24P83731 157 aaKnown RBP11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 GCSAMLQ5JQS6 135 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ASPHD1Q5U4P2 390 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 SSC4DQ8WTU2 575 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 SERTAD4Q9NUC0 356 aa11.75□□□□□ -0.53
TNFRSF11A-201ENST00000269485 SYNGR2O43760 224 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 CDS2O95674 445 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TMEM50AO95807 157 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 GLRX2Q9NS18 164 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 MMP23AO75900 390 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 LOC102723971A0A1B0GUV8 181 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 F2Z2F3 143 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 NDUFS7O75251 213 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 SERF1AO75920 110 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 PDLIM3Q53GG5 364 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 Q56UQ5 140 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TCTEX1D1Q8N7M0 179 aa11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 MSI2Q96DH6 328 aaKnown RBP11.74□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ITPR1Q14643 2758 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 DUXBA0A1W2PPF3 345 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 PRRX1P54821 245 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 C19orf35Q6ZS72 473 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 MOB3BQ86TA1 216 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ZANQ9Y493 2812 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TRGV10A0A0A0MS01 117 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 COQ2Q96H96 371 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 IER3P46695 156 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ARF6P62330 175 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TBR1Q16650 682 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 C10orf55Q5SWW7 151 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 CSMD2Q7Z408 3487 aa11.73□□□□□ -0.53
TNFRSF11A-201ENST00000269485 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 MLANAQ16655 118 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 LCN12Q6JVE5 192 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 Q6ZWC4 215 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 OR5D13Q8NGL4 314 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 DSCAMO60469 2012 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 LINC00473A8K010 186 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 IGHG3P01860 377 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 LYPD2Q6UXB3 125 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 Q6ZS92 163 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 OR4B1Q8NGF8 309 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 RNF7Q9UBF6 113 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
TNFRSF11A-201ENST00000269485 A0A1W2PPV4 95 aa11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 NDUFS8O00217 210 aa11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 PAGE4O60829 102 aa11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 ZNF253O75346 499 aa11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 NIT1Q86X76 327 aa11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 OR51G1Q8NGK1 321 aa11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 LIN7CQ9NUP9 197 aaKnown RBP11.71□□□□□ -0.53
TNFRSF11A-201ENST00000269485 NDUFB8O95169 186 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 MAS1LP35410 378 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 TCL1AP56279 114 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 RELBQ01201 579 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 BOD1Q96IK1 185 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 NCOR1P1Q9H4R4 102 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 CTXN2P0C2S0 81 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 CD99P14209 185 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 IL3RAP26951 378 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 OR4C12Q96R67 309 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 ZNF355PQ9NSJ1 428 aa11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF11A-201ENST00000269485 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms