RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 DUXBA0A1W2PPF3 345 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 CCL24O00175 119 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 ADAP1O75689 374 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 LGALS1P09382 135 aaKnown RBP9.87□□□□□ -0.83
SS18-202ENST00000269138 DEFA4P12838 97 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 SPCS3P61009 180 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 RUNX1Q01196 453 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 GGNBP1Q5YKI7 109 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 HSD17B13Q7Z5P4 300 aaPredicted RBP9.87□□□□□ -0.83
SS18-202ENST00000269138 OR2C3Q8N628 320 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 PLEKHA3Q9HB20 300 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 S4R3C0 116 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 PKD1L1Q8TDX9 2849 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 A0A0G2JLM5 398 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 A0A1B0GU03 582 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 ANKRD34BA5PLL1 514 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 MPTX1A8MV57 137 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 PF4P02776 101 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 MYCNOSP40205 109 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 ATP5G2Q06055 141 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 C15orf32Q32M92 178 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 SLC25A24Q6NUK1 477 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 NECAP1Q8NC96 275 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 OR11H1Q8NG94 326 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 OR1N2Q8NGR9 330 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 COQ8AQ8NI60 647 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 MITD1Q8WV92 249 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 USMG5Q96IX5 58 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 P2RX4Q99571 388 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 PDCD10Q9BUL8 212 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 TMED3Q9Y3Q3 217 aa9.86□□□□□ -0.83
SS18-202ENST00000269138 F11RQ9Y624 299 aaKnown RBP9.86□□□□□ -0.83
SS18-202ENST00000269138 IGHV4OR15-8A0A075B7B6 117 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 A0A087WW49 117 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 FAM223BA6NKX1 122 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 PITX3O75364 302 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 DHFRP00374 187 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 TRBV12-3P01733 135 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 IGHV3-23P01764 117 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 HOXA1P49639 335 aaPredicted RBP9.85□□□□□ -0.83
SS18-202ENST00000269138 EXOSC2Q13868 293 aaKnown RBP9.85□□□□□ -0.83
SS18-202ENST00000269138 FAM223AQ8IWN6 122 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 MRPL41Q8IXM3 137 aaKnown RBP9.85□□□□□ -0.83
SS18-202ENST00000269138 OR52E5Q8NH55 327 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 OR1S1Q8NH92 325 aa9.85□□□□□ -0.83
SS18-202ENST00000269138 ZNF431Q8TF32 576 aaPredicted RBP9.85□□□□□ -0.83
SS18-202ENST00000269138 IGHV3-21A0A0B4J1V1 117 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 PIGBOS1A0A0B4J2F0 54 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 CEBPZOSA8MTT3 80 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 INMT-MINDY4F8WBC2 141 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 IL5P05113 134 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 HIST1H1BP16401 226 aaKnown RBP9.84□□□□□ -0.83
SS18-202ENST00000269138 ERHP84090 104 aaKnown RBP9.84□□□□□ -0.83
SS18-202ENST00000269138 TNFRSF9Q07011 255 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 PDLIM3Q53GG5 364 aaPredicted RBP9.84□□□□□ -0.83
SS18-202ENST00000269138 ZNF343Q6P1L6 599 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 PLET1Q6UQ28 207 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 UXS1Q8NBZ7 420 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 RBKSQ9H477 322 aa9.84□□□□□ -0.83
SS18-202ENST00000269138 MFSD2BA6NFX1 497 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 INS-IGF2F8WCM5 200 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 HSPB1P04792 205 aaKnown RBP9.83□□□□□ -0.84
SS18-202ENST00000269138 SLC25A6P12236 298 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 SLURP1P55000 103 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 ZNF616Q08AN1 781 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 FHL3Q13643 280 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 C12orf45Q8N5I9 185 aaPredicted RBP9.83□□□□□ -0.84
SS18-202ENST00000269138 OR1P1Q8NH06 330 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 MARVELD1Q9BSK0 173 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 ENY2Q9NPA8 101 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 HSPB7Q9UBY9 170 aa9.83□□□□□ -0.84
SS18-202ENST00000269138 MGAM2Q2M2H8 2515 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 LINC01619G3V211 115 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 CCSO14618 274 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 IFNA21P01568 189 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 RNASE2P10153 161 aaKnown RBP9.82□□□□□ -0.84
SS18-202ENST00000269138 SNCAP37840 140 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 WFDC9Q8NEX5 89 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 DPF1Q92782 380 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 OR10C1Q96KK4 312 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 CCDC140Q96MF4 163 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 HEYLQ9NQ87 328 aaPredicted RBP9.82□□□□□ -0.84
SS18-202ENST00000269138 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
SS18-202ENST00000269138 CMYA5Q8N3K9 4069 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
SS18-202ENST00000269138 K7EIM0 57 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 MISP3Q96FF7 219 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 MAGT1Q9H0U3 335 aa9.82□□□□□ -0.84
SS18-202ENST00000269138 PPP5D1E7EU14 171 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 BMPR1BO00238 502 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 CYB5BO43169 146 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 IGHV3-48P01763 117 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 CD33P20138 364 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 DCTN2Q13561 401 aaKnown RBP9.81□□□□□ -0.84
SS18-202ENST00000269138 BSXQ3C1V8 233 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms