RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TBR1Q16650 682 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 GGACTQ9BVM4 153 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 CGAP01215 116 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 TMEM30BQ3MIR4 351 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 MGST2Q99735 147 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 RND3P61587 244 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 TUBGCP6Q96RT7 1819 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
CDH11-201ENST00000268603 IMMP2LQ96T52 175 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 PILRBQ9UKJ0 227 aa10.65□□□□□ -0.7
CDH11-201ENST00000268603 CD300CQ08708 224 aa10.65□□□□□ -0.71
CDH11-201ENST00000268603 ZXDCQ2QGD7 858 aaPredicted RBP10.65□□□□□ -0.71
CDH11-201ENST00000268603 Q9H3A6 140 aa10.65□□□□□ -0.71
CDH11-201ENST00000268603 FOXS1O43638 330 aa10.65□□□□□ -0.71
CDH11-201ENST00000268603 TMEM52Q8NDY8 209 aa10.65□□□□□ -0.71
CDH11-201ENST00000268603 ITGB1BP1O14713 200 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 IGFBP2P18065 325 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 CXCL2P19875 107 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 IFI27L2Q9H2X8 130 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 CLPSL1A2RUU4 121 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 FAM216BQ8N7L0 139 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 OR52E5Q8NH55 327 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 ERG28Q9UKR5 140 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 UBE2E2Q96LR5 201 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
CDH11-201ENST00000268603 CCL1P22362 96 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 CA7P43166 264 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 TIMM23BQ5SRD1 257 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 ZNF114Q8NC26 417 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 COQ2Q96H96 371 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 PRDM6Q9NQX0 595 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 ATG2BQ96BY7 2078 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 CCDC88CQ9P219 2028 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 ESDP10768 282 aa10.64□□□□□ -0.71
CDH11-201ENST00000268603 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
CDH11-201ENST00000268603 H3BMM0 161 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
CDH11-201ENST00000268603 DTX1Q86Y01 620 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 RFLNBQ8N5W9 214 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 IGKV1D-16P01601 117 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 RPL34P49207 117 aaKnown RBP10.63□□□□□ -0.71
CDH11-201ENST00000268603 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
CDH11-201ENST00000268603 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 RHOGP84095 191 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 FAM166AQ6J272 317 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 IL36BQ9NZH7 164 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 ARAP2Q8WZ64 1704 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 TMEM8BA6NDV4 472 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 DPM2O94777 84 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 WNT2P09544 360 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 KIAA0040Q15053 153 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 ICE1Q9Y2F5 2266 aa10.63□□□□□ -0.71
CDH11-201ENST00000268603 FAM90A26D6RGX4 464 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 UCP3P55916 312 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 SRSF1Q07955 248 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDH11-201ENST00000268603 GATAD1Q8WUU5 269 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 MDC1Q14676 2089 aaKnown RBP10.62□□□□□ -0.71
CDH11-201ENST00000268603 COX6A1P12074 109 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 PEBP1P30086 187 aaKnown RBP10.62□□□□□ -0.71
CDH11-201ENST00000268603 ZNF638Q14966 1978 aaKnown RBP10.62□□□□□ -0.71
CDH11-201ENST00000268603 FXYD1O00168 92 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 NBR2O15453 112 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 TMEM91Q6ZNR0 172 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 EPDR1Q9UM22 224 aa10.62□□□□□ -0.71
CDH11-201ENST00000268603 THBDP07204 575 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 GLRXP35754 106 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 GATA4P43694 442 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 ZP1P60852 638 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 GDF15Q99988 308 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 A0A1W2PPC1 479 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 ACP7Q6ZNF0 438 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 Q6ZT83 130 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
CDH11-201ENST00000268603 DEFB130BP0DP73 79 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 DEFB130AP0DP74 79 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 SLC25A47Q6Q0C1 308 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 SLC22A18ASQ8N1D0 253 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 PLAC1Q9HBJ0 212 aa10.61□□□□□ -0.71
CDH11-201ENST00000268603 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 GNG5P63218 68 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 FUT5Q11128 374 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 CSRP2Q16527 193 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 ASCL2Q99929 193 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 MARF1Q9Y4F3 1742 aaKnown RBP10.6□□□□□ -0.71
CDH11-201ENST00000268603 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 TM4SF5O14894 197 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 TMEM219Q86XT9 240 aa10.6□□□□□ -0.71
CDH11-201ENST00000268603 CIARTQ8N365 385 aaPredicted RBP10.6□□□□□ -0.71
CDH11-201ENST00000268603 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms