RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 E7EUB6 86 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 APOA2P02652 100 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 NDUFB7P17568 137 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 SPATA31B1PQ5VZV4 182 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 ZCCHC24Q8N2G6 241 aaKnown RBP9.01□□□□□ -0.97
MSH3-201ENST00000265081 OR9G1Q8NH87 305 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 VSTM2AQ8TAG5 236 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 A0A1W2PN81 502 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 LY6LH3BQJ8 138 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 DLL1O00548 723 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 OR10J4P0C629 311 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 CHRNA7P36544 502 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 GALR1P47211 349 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 ALKBH2Q6NS38 261 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 ST6GALNAC3Q8NDV1 305 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 LY6G5BQ8NDX9 201 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 BEND2Q8NDZ0 799 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 OR4X1Q8NH49 305 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 OR51M1Q9H341 326 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 ENY2Q9NPA8 101 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 VSTM5A8MXK1 200 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 SOD3P08294 240 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 RPL8P62917 257 aaKnown RBP9.01□□□□□ -0.97
MSH3-201ENST00000265081 MRPL32Q9BYC8 188 aaKnown RBP9.01□□□□□ -0.97
MSH3-201ENST00000265081 WASHC3Q9Y3C0 194 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 CACNA1DQ01668 2161 aa9.01□□□□□ -0.97
MSH3-201ENST00000265081 IGKV1D-37A0A075B6S9 117 aa9□□□□□ -0.97
MSH3-201ENST00000265081 FLYWCH2Q96CP2 140 aaKnown RBP9□□□□□ -0.97
MSH3-201ENST00000265081 DERL1Q9BUN8 251 aa9□□□□□ -0.97
MSH3-201ENST00000265081 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
MSH3-201ENST00000265081 MC5RP33032 325 aa9□□□□□ -0.97
MSH3-201ENST00000265081 RAB31Q13636 194 aa9□□□□□ -0.97
MSH3-201ENST00000265081 DIAPH2-AS1Q14236 149 aa9□□□□□ -0.97
MSH3-201ENST00000265081 HLA-DRB5Q30154 266 aa9□□□□□ -0.97
MSH3-201ENST00000265081 FAM167A-AS1Q96KT0 104 aa9□□□□□ -0.97
MSH3-201ENST00000265081 HARBI1Q96MB7 349 aa9□□□□□ -0.97
MSH3-201ENST00000265081 TMEM133Q9H2Q1 129 aa9□□□□□ -0.97
MSH3-201ENST00000265081 WT1-ASQ06250 92 aa9□□□□□ -0.97
MSH3-201ENST00000265081 HNF4GQ14541 408 aa9□□□□□ -0.97
MSH3-201ENST00000265081 ZNF672Q499Z4 452 aaPredicted RBP9□□□□□ -0.97
MSH3-201ENST00000265081 ELOVL1Q9BW60 279 aa9□□□□□ -0.97
MSH3-201ENST00000265081 FOXH1O75593 365 aa9□□□□□ -0.97
MSH3-201ENST00000265081 UCNP55089 124 aa9□□□□□ -0.97
MSH3-201ENST00000265081 TEX45Q8NA69 505 aa9□□□□□ -0.97
MSH3-201ENST00000265081 H7BYZ3 331 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 NDUFB4O95168 129 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 FOXC1Q12948 553 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 PITPNC1Q9UKF7 332 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 DMXL2Q8TDJ6 3036 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 FAM186AA6NE01 2351 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 SCO2A0A1W2PP80 73 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 K7EN84 100 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 PAX1P15863 534 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 LGALS7P47929 136 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 SSMEM1Q8WWF3 244 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 TTC28Q96AY4 2481 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 ACY3Q96HD9 319 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 SFRP2Q96HF1 295 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 RNF2Q99496 336 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 GSN-AS1Q9NRJ2 163 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.99□□□□□ -0.97
MSH3-201ENST00000265081 C11orf71Q6IPW1 123 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 TMEM183AQ8IXX5 376 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 OR10W1Q8NGF6 305 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
MSH3-201ENST00000265081 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
MSH3-201ENST00000265081 DIDO1Q9BTC0 2240 aaKnown RBP8.98□□□□□ -0.97
MSH3-201ENST00000265081 MT-CO2P00403 227 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 MIR17HGQ75NE6 70 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 SLC16A13Q7RTY0 426 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 IGF2BP2-AS1Q96M15 143 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 ZNF430Q9H8G1 570 aaPredicted RBP8.98□□□□□ -0.97
MSH3-201ENST00000265081 CD3EP07766 207 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 CASP6P55212 293 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 YPEL3P61236 119 aaPredicted RBP8.98□□□□□ -0.97
MSH3-201ENST00000265081 PQLC2Q6ZP29 291 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 MOB3BQ86TA1 216 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 TMEM37Q8WXS4 190 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 CCL17Q92583 94 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 SLC25A33Q9BSK2 321 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 IGLC7A0M8Q6 106 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 MYCNOSP40205 109 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 PYY3Q5JQD4 70 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 TEX38Q6PEX7 206 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 OR4P4Q8NGL7 312 aa8.98□□□□□ -0.97
MSH3-201ENST00000265081 FNDC4Q9H6D8 234 aaPredicted RBP8.98□□□□□ -0.97
MSH3-201ENST00000265081 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
MSH3-201ENST00000265081 A0A1W2PRE2 83 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 S100PP25815 95 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 CHRNB4P30926 498 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 NDUFA6P56556 154 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 OR2T10Q8NGZ9 312 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 RITA1Q96K30 269 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 RNF5Q99942 180 aa8.97□□□□□ -0.97
MSH3-201ENST00000265081 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
MSH3-201ENST00000265081 TECRQ9NZ01 308 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms