RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 WISP2O76076 250 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 GCHFRP30047 84 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 S100A7AQ86SG5 101 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 MRPL18Q9H0U6 180 aaKnown RBP16.45■□□□□ 0.22
CSPG5-201ENST00000264723 TMEM14EPQ6UXP3 125 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 TMEM106BQ9NUM4 274 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 ZNF474Q6S9Z5 364 aaPredicted RBP16.45■□□□□ 0.22
CSPG5-201ENST00000264723 ATOH7Q8N100 152 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 ZNRD1Q9P1U0 126 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 NUBP1P53384 320 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 MIR17HGQ75NE6 70 aa16.45■□□□□ 0.22
CSPG5-201ENST00000264723 ZNF25P17030 456 aaPredicted RBP16.44■□□□□ 0.22
CSPG5-201ENST00000264723 CD177Q8N6Q3 437 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 TMUB1Q9BVT8 246 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 TIMM9Q9Y5J7 89 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 NUP210LQ5VU65 1888 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 A0A1B0GW64 132 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 CCKARP32238 428 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 OR4A47Q6IF82 309 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 NABP2Q9BQ15 211 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 ASCL3Q9NQ33 180 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 DUTP33316 252 aaKnown RBP16.44■□□□□ 0.22
CSPG5-201ENST00000264723 MFAP2P55001 183 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 MORN2Q502X0 79 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 TMEM256Q8N2U0 113 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 OCC1Q8TAD7 63 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 TNFRSF19Q9NS68 423 aa16.44■□□□□ 0.22
CSPG5-201ENST00000264723 C17orf100A8MU93 164 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 CSN3P07498 182 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 SRP14P37108 136 aaKnown RBP16.43■□□□□ 0.22
CSPG5-201ENST00000264723 UCNP55089 124 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 WDR31Q8NA23 367 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 NAGKQ9UJ70 344 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 KLF2Q9Y5W3 355 aaPredicted RBP16.43■□□□□ 0.22
CSPG5-201ENST00000264723 SLC31A2O15432 143 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 CT45A10P0DMU9 189 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 Q6ZS49 121 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 OR2D3Q8NGH3 330 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 REV3LO60673 3130 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 KBTBD11-OT1A0A1B0GTJ5 212 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 K7EQM0 130 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 LINC00869P0C866 280 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 GPR6P46095 362 aaPredicted RBP16.43■□□□□ 0.22
CSPG5-201ENST00000264723 ZNF137PP52743 207 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 SLC25A15Q9Y619 301 aa16.43■□□□□ 0.22
CSPG5-201ENST00000264723 TRAV1-1A0A0B4J248 108 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 M0R143 59 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 USF1P22415 310 aaPredicted RBP16.42■□□□□ 0.22
CSPG5-201ENST00000264723 CEACAM3P40198 252 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 MLANAQ16655 118 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 TCTEX1D1Q8N7M0 179 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 PRO3102Q9H379 93 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 RPL27AP46776 148 aaKnown RBP16.42■□□□□ 0.22
CSPG5-201ENST00000264723 RND2P52198 227 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 ASCL5Q7RTU5 278 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 MMD2Q8IY49 270 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 DIRC2Q96SL1 478 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 IGHV1-46P01743 117 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 CLEC3BP05452 202 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 CSN1S1P47710 185 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 CENPWQ5EE01 88 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 OR2T6Q8NHC8 308 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 RNASE7Q9H1E1 156 aaKnown RBP16.42■□□□□ 0.22
CSPG5-201ENST00000264723 SEPSECSQ9HD40 501 aaKnown RBP16.42■□□□□ 0.22
CSPG5-201ENST00000264723 TMEM167BQ9NRX6 74 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 ARL2-SNX15V9GYD0 113 aa16.42■□□□□ 0.22
CSPG5-201ENST00000264723 PPIAL4CA0A0B4J2A2 164 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.41■□□□□ 0.22
CSPG5-201ENST00000264723 FOXH1O75593 365 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 IGHG3P01860 377 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 PPIAL4GP0DN37 164 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 PRR30Q53SZ7 412 aaPredicted RBP16.41■□□□□ 0.22
CSPG5-201ENST00000264723 FAM90A1Q86YD7 464 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 OR1L4Q8NGR5 311 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 TRBV24-1A0A075B6N3 115 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 IGHV3-35A0A0C4DH35 117 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 MPDU1O75352 247 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 GPX4P36969 197 aaPredicted RBP16.41■□□□□ 0.22
CSPG5-201ENST00000264723 KHDC1LQ5JSQ8 128 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 TREML4Q6UXN2 200 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 REC114Q7Z4M0 266 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 PPP1R14DQ9NXH3 145 aa16.41■□□□□ 0.22
CSPG5-201ENST00000264723 SRSF7Q16629 238 aaKnown RBP eCLIP16.4■□□□□ 0.22
CSPG5-201ENST00000264723 CA1P00915 261 aaPredicted RBP16.4■□□□□ 0.22
CSPG5-201ENST00000264723 LY6DQ14210 128 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 ZNF600Q6ZNG1 722 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 NPIPB3Q92617 1050 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 WDR83OSQ9Y284 106 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 SAA2-SAA4A0A096LPE2 208 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 SRRM5B3KS81 715 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 C10orf142B7Z368 130 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 CHEK1O14757 476 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 SAA2P0DJI9 122 aaPredicted RBP16.4■□□□□ 0.22
CSPG5-201ENST00000264723 PNKDQ8N490 385 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 OR10W1Q8NGF6 305 aa16.4■□□□□ 0.22
CSPG5-201ENST00000264723 AMMECR1Q9Y4X0 333 aaPredicted RBP16.4■□□□□ 0.22
CSPG5-201ENST00000264723 WDFY4Q6ZS81 3184 aa16.39■□□□□ 0.22
CSPG5-201ENST00000264723 MYO18BQ8IUG5 2567 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 GNG7O60262 68 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 ETFRF1Q6IPR1 90 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms