RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TMEM208Q9BTX3 173 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 MSMPQ1L6U9 139 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 CT45A1Q5HYN5 189 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 FDCSPQ8NFU4 85 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 CT45A3Q8NHU0 189 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 GOLT1BQ9Y3E0 138 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 J3QW42 95 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 IGKV1-16P04430 117 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 APELAP0DMC3 54 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 HSPE1P61604 102 aaKnown RBP10.18□□□□□ -0.78
CHMP3-201ENST00000263856 SPATA45Q537H7 98 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
CHMP3-201ENST00000263856 IGKV3-15P01624 115 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 STARD4Q96DR4 205 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 CCL13Q99616 98 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 MIEN1Q9BRT3 115 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 V9GYV3 84 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 DMXL2Q8TDJ6 3036 aa10.18□□□□□ -0.78
CHMP3-201ENST00000263856 TNFSF13O75888 250 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 CAMPP49913 170 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 MMDQ15546 238 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 TMEM68Q96MH6 324 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 NRN1Q9NPD7 142 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 IL19Q9UHD0 177 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 PRSS46E5RG02 174 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 YPEL1O60688 119 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 BRS3P32247 399 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 LOXL3P58215 753 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 UBE2L3P68036 154 aaKnown RBP10.17□□□□□ -0.78
CHMP3-201ENST00000263856 PEAR1Q5VY43 1037 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-201ENST00000263856 FAM216BQ8N7L0 139 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 YPEL2Q96QA6 119 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 IDI2-AS1Q9NZ38 188 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 CLCF1Q9UBD9 225 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 SLC45A2Q9UMX9 530 aa10.17□□□□□ -0.78
CHMP3-201ENST00000263856 MMP23AO75900 390 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 PYYP10082 97 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 USF1P22415 310 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 GPR6P46095 362 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 TRAT1Q6PIZ9 186 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 PROCRQ9UNN8 238 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 DYSFO75923 2080 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 SRRM5B3KS81 715 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 GGTLC3B5MD39 225 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 LCN12Q6JVE5 192 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 Q6ZN92 141 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 OR2T6Q8NHC8 308 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 TXNDC17Q9BRA2 123 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 ZNF355PQ9NSJ1 428 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 DCAF16Q9NXF7 216 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 IGKV1OR2-108A0A075B7D4 117 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 TRGV10A0A0A0MS01 117 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 RPL19P84098 196 aaKnown RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 MORN5Q5VZ52 161 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 LPAR2Q9HBW0 351 aa10.16□□□□□ -0.78
CHMP3-201ENST00000263856 ZNF331Q9NQX6 463 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
CHMP3-201ENST00000263856 H3BTX0 84 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 DLEU1O43261 78 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 TCF21O43680 179 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 OR5G3P0C626 314 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 CHRNB4P30926 498 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 Q6ZVH6 145 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 BHLHA15Q7RTS1 189 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-201ENST00000263856 BLNKQ8WV28 456 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 FAM168AQ92567 244 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 BORCS7Q96B45 105 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 IGHV3-21A0A0B4J1V1 117 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 TOX4O94842 621 aa10.15□□□□□ -0.78
CHMP3-201ENST00000263856 ZCCHC24Q8N2G6 241 aaKnown RBP10.15□□□□□ -0.78
CHMP3-201ENST00000263856 REG1AP05451 166 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 GPX1P07203 203 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 CD59P13987 128 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 MFAP2P55001 183 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 SELENOTP62341 195 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 TRIP6Q15654 476 aaKnown RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 RNASEKQ6P5S7 137 aaKnown RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 TMEM167BQ9NRX6 74 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 SRRM4A7MD48 611 aaKnown RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 LINC00869P0C866 280 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 KLF3P57682 345 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 C10orf55Q5SWW7 151 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 COLQQ9Y215 455 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 A0A1W2PS18 150 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 ZNF891A8MT65 544 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 H0Y8G0 127 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 APCSP02743 223 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms