RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 ZNF506Q5JVG8 444 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 HIST1H4GQ99525 98 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 M0R381 172 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 IGHV3-11P01762 117 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 SAA2-SAA4A0A096LPE2 208 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 SAA1P0DJI8 122 aaPredicted RBP14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 SAA2P0DJI9 122 aaPredicted RBP14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 SUMO2P61956 95 aaKnown RBP14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 OR10S1Q8NGN2 331 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 GPR61Q9BZJ8 451 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 MRPS16Q9Y3D3 137 aaKnown RBP14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 A0A1B0GV90 55 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 CGAP01215 116 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 C12orf54Q6X4T0 127 aa14.13□□□□□ -0.15
CROCCP3-201ENST00000263511 IGHV1-18A0A0C4DH31 117 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 A0A1W2PRX2 142 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 PINLYPA6NC86 204 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 EGR1P18146 543 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 VDAC2P45880 294 aaPredicted RBP14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 DNLZQ5SXM8 178 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 RTBDNQ9BSG5 229 aaPredicted RBP14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 WNK3Q9BYP7 1800 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 LINC00271P0C7V0 271 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 TFF3Q07654 80 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 PEX7O00628 323 aa14.12□□□□□ -0.15
CROCCP3-201ENST00000263511 UPK2O00526 184 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 TIMP3P35625 211 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 C7orf71A4D174 169 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 PSMB11A5LHX3 300 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 UQCRFS1P47985 274 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 TAS2R60P59551 318 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 TBR1Q16650 682 aa14.11□□□□□ -0.15
CROCCP3-201ENST00000263511 CCL1P22362 96 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 SLC25A34Q6PIV7 304 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 GTF3AQ92664 365 aaKnown RBP14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 GREB1LQ9C091 1923 aaPredicted RBP14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 IGHV3OR16-8A0A075B7F1 116 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 IL18BPO95998 194 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 ZCCHC24Q8N2G6 241 aaKnown RBP14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 PCP4P48539 62 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 REC114Q7Z4M0 266 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 FMC1Q96HJ9 113 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 FABP2P12104 132 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 ESPL1Q14674 2120 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 LINC01587Q99440 93 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 MTCL1Q9Y4B5 1905 aaKnown RBP14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 MORN2Q502X0 79 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 FBLN5Q9UBX5 448 aa14.1□□□□□ -0.15
CROCCP3-201ENST00000263511 A8MXK9 166 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 PAX1P15863 534 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 ZNF497Q6ZNH5 498 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 UQCR10Q9UDW1 63 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 FBLL1A6NHQ2 334 aaKnown RBP14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 LYNX1G3V0Z9 82 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 LYNX1P0DP58 116 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 JOSD1Q15040 202 aaPredicted RBP14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 TMEM144Q7Z5S9 345 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 DMRTA2Q96SC8 542 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 MDC1Q14676 2089 aaKnown RBP14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 ARID2Q68CP9 1835 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 DSCR9P59020 149 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 CIARTQ8N365 385 aaPredicted RBP14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 OTX1P32242 354 aaPredicted RBP14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 LYZL4Q96KX0 146 aa14.09□□□□□ -0.15
CROCCP3-201ENST00000263511 SDK2Q58EX2 2172 aa14.08□□□□□ -0.15
CROCCP3-201ENST00000263511 GSN-AS1Q9NRJ2 163 aa14.08□□□□□ -0.15
CROCCP3-201ENST00000263511 ANKRD36A6QL64 1941 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 ZP1P60852 638 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 ALKBH7Q9BT30 221 aaPredicted RBP14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 AKAP6Q13023 2319 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 ARL6IP6Q8N6S5 226 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 PRELID3AQ96N28 172 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 LOC285556D6RIA3 1793 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 IGHV1-46P01743 117 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 RNASE1P07998 156 aaKnown RBP14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 PVRIGQ6DKI7 326 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 SDF2L1Q9HCN8 221 aa14.08□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF646O15015 1829 aaPredicted RBP14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 HINT1P49773 126 aaPredicted RBP14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 PATJQ8NI35 1801 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 IGKV1-9A0A0C4DH69 117 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 A0A1B0GUT8 65 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 C15orf61A6NNL5 157 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 LYPD3O95274 346 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 FOXF2Q12947 444 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 C17orf82Q86X59 251 aaPredicted RBP14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 FAM131CQ96AQ9 280 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 PLSCR4Q9NRQ2 329 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 XIRP1Q702N8 1843 aaKnown RBP14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 TRGV2A0A075B6R0 118 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 GRIFINA4D1Z8 144 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 Q6AWC8 147 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 TMEM136Q6ZRR5 245 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 LRTM2Q8N967 370 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 TNFRSF14Q92956 283 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 MESP1Q9BRJ9 268 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 SLC50A1Q9BRV3 221 aa14.07□□□□□ -0.16
CROCCP3-201ENST00000263511 Q9H3A6 140 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms