RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF71Q9NQZ8 489 aaPredicted RBP7.49□□□□□ -1.21
MSH4-201ENST00000263187 PPIAL4AQ9Y536 164 aa7.49□□□□□ -1.21
MSH4-201ENST00000263187 ZNF292O60281 2723 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 TRAV34A0A0B4J273 112 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 TMPRSS2O15393 492 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 PDLIM4P50479 330 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 LGALS4P56470 323 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 SSBP2P81877 361 aaPredicted RBP7.48□□□□□ -1.21
MSH4-201ENST00000263187 FAM27E3Q08E93 113 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 C17orf58Q2M2W7 97 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 COA6Q5JTJ3 125 aaKnown RBP7.48□□□□□ -1.21
MSH4-201ENST00000263187 C10orf55Q5SWW7 151 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 PRR27Q6MZM9 219 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 FAM90A1Q86YD7 464 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 MMD2Q8IY49 270 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 PLEKHA3Q9HB20 300 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 PARD6AQ9NPB6 346 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 DKK4Q9UBT3 224 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 RPH3ALQ9UNE2 315 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 PTPRBP23467 1997 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 PRSS46E5RG02 174 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 H3BTX0 84 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 REG1AP05451 166 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 GNG4P50150 75 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 RHOBP62745 196 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 OR4S2Q8NH73 311 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 IDI2-AS1Q9NZ38 188 aa7.48□□□□□ -1.21
MSH4-201ENST00000263187 MAP1AP78559 2803 aaPredicted RBP7.48□□□□□ -1.21
MSH4-201ENST00000263187 HELTA6NFD8 242 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 C15orf61A6NNL5 157 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 MKRN2OSH3BPM6 223 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 J3QW42 95 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 TYMSP04818 313 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 KLF3P57682 345 aaPredicted RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 LINC00310P59036 64 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 LCN2P80188 198 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 DIAPH2-AS1Q14236 149 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 C19orf35Q6ZS72 473 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 SEM1Q6ZVN7 128 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 FAM19A2Q8N3H0 131 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 NOL4LQ96MY1 436 aaPredicted RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 JPT1Q9UK76 154 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 TLN1Q9Y490 2541 aaKnown RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 YPEL1O60688 119 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 ZNF883P0CG24 379 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 CCL3L1P16619 93 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 CHRNB4P30926 498 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 HSPE1P61604 102 aaKnown RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 ZNF474Q6S9Z5 364 aaPredicted RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 ZCCHC14Q8WYQ9 949 aaKnown RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 SARAFQ96BY9 339 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
MSH4-201ENST00000263187 YPEL2Q96QA6 119 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 COL12A1Q99715 3063 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 E7EUB6 86 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 PYYP10082 97 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 NTF3P20783 257 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 CCKARP32238 428 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 NHLH1Q02575 133 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 FOXL1Q12952 345 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 RAB31Q13636 194 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 PPP1R35Q8TAP8 253 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 FAM168AQ92567 244 aa7.47□□□□□ -1.21
MSH4-201ENST00000263187 TRGV10A0A0A0MS01 117 aa7.46□□□□□ -1.21
MSH4-201ENST00000263187 IGHV3-72A0A0B4J1Y9 119 aa7.46□□□□□ -1.21
MSH4-201ENST00000263187 RCHY1Q96PM5 261 aa7.46□□□□□ -1.21
MSH4-201ENST00000263187 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.21
MSH4-201ENST00000263187 SLC25A15Q9Y619 301 aa7.46□□□□□ -1.21
MSH4-201ENST00000263187 AKAP6Q13023 2319 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 A8MXE2 369 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 TOX4O94842 621 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 ZNF25P17030 456 aaPredicted RBP7.46□□□□□ -1.22
MSH4-201ENST00000263187 TFPI2P48307 235 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 TNFAIP6P98066 277 aaPredicted RBP7.46□□□□□ -1.22
MSH4-201ENST00000263187 RPEL1Q2QD12 228 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
MSH4-201ENST00000263187 GNB4Q9HAV0 340 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 SLC35D1Q9NTN3 355 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 IL36BQ9NZH7 164 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 CUL9Q8IWT3 2517 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 KBTBD11-OT1A0A1B0GTJ5 212 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 GGTLC3B5MD39 225 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 K7EM74 188 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 MPDU1O75352 247 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 LINC00869P0C866 280 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 RAB1CQ92928 201 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 BTF3L4Q96K17 158 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 C2orf88Q9BSF0 95 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 PLSCR4Q9NRQ2 329 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 TMEM106BQ9NUM4 274 aa7.46□□□□□ -1.22
MSH4-201ENST00000263187 TRAV17A0A0B4J275 112 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 IGHG3P01860 377 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 CT45A6P0DMU7 189 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 CT45A5P0DMU8 189 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 CT45A7P0DMV0 189 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms