RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 OR8B2Q96RD0 313 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 CDX2Q99626 313 aaPredicted RBP12.36□□□□□ -0.43
XRCC1-201ENST00000262887 GP6Q9HCN6 339 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 FAM90A9PA6NNJ1 464 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 MGST1P10620 155 aaKnown RBP12.35□□□□□ -0.43
XRCC1-201ENST00000262887 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
XRCC1-201ENST00000262887 GPR12P47775 334 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 HCFC1P51610 2035 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 ERVK-16P61578 105 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 ZNF766Q5HY98 468 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 MIR17HGQ75NE6 70 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 OR52E5Q8NH55 327 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 TOX4O94842 621 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 SMIM21Q3B7S5 101 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 Q6ZR03 302 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 OR13A1Q8NGR1 328 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 PLPPR2Q96GM1 343 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 CACNA1DQ01668 2161 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 ZFHX4Q86UP3 3567 aa12.35□□□□□ -0.43
XRCC1-201ENST00000262887 CORTO00230 105 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 PLGLB1Q02325 96 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 TBC1D28Q2M2D7 210 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 Q8TCH9 128 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 SLC25A10Q9UBX3 287 aaPredicted RBP12.34□□□□□ -0.43
XRCC1-201ENST00000262887 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 VWA1Q6PCB0 445 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 ZNF826PQ6ZT77 177 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 PPP1R32Q7Z5V6 425 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 SPACA3Q8IXA5 215 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 NANOS1Q8WY41 292 aaKnown RBP12.34□□□□□ -0.43
XRCC1-201ENST00000262887 GCM1Q9NP62 436 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 TECRQ9NZ01 308 aaKnown RBP12.34□□□□□ -0.43
XRCC1-201ENST00000262887 FRYQ5TBA9 3013 aa12.34□□□□□ -0.43
XRCC1-201ENST00000262887 IGLV2-8P01709 118 aa12.33□□□□□ -0.43
XRCC1-201ENST00000262887 TCF19Q9Y242 345 aa12.33□□□□□ -0.43
XRCC1-201ENST00000262887 TET2Q6N021 2002 aaPredicted RBP12.33□□□□□ -0.44
XRCC1-201ENST00000262887 PTPRBP23467 1997 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
XRCC1-201ENST00000262887 IGFBP2P18065 325 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 MPV17L2Q567V2 206 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 C2orf70A6NJV1 201 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 SPINT2O43291 252 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 SMPD2O60906 423 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 PROP1O75360 226 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 NHLH1Q02575 133 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
XRCC1-201ENST00000262887 WFDC8Q8IUA0 241 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 WIPF2Q8TF74 440 aaPredicted RBP12.33□□□□□ -0.44
XRCC1-201ENST00000262887 NEUROG1Q92886 237 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 PLEKHA3Q9HB20 300 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
XRCC1-201ENST00000262887 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 CACNA1EQ15878 2313 aa12.33□□□□□ -0.44
XRCC1-201ENST00000262887 PRRC2CQ9Y520 2896 aaKnown RBP12.32□□□□□ -0.44
XRCC1-201ENST00000262887 M0R1X1 148 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 NPY1RP25929 384 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 PRR20EP86478 221 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 PRR20CP86479 221 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 PRR20DP86480 221 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 PRR20BP86481 221 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 PRR20AP86496 221 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 RASL11AQ6T310 242 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 SAP30LQ9HAJ7 183 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 OBP2BQ9NPH6 170 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 TMEM140Q9NV12 185 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 BOD1L1Q8NFC6 3051 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 OR7C2O60412 319 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 SP1P08047 785 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 CELA3BP08861 270 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 PPOXP50336 477 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 KLF5Q13887 457 aaPredicted RBP12.32□□□□□ -0.44
XRCC1-201ENST00000262887 GABRA6Q16445 453 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 C3AR1Q16581 482 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 FAM216AQ8WUB2 273 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 COMMD5Q9GZQ3 224 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
XRCC1-201ENST00000262887 DCHS1Q96JQ0 3298 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 AHRRA9YTQ3 701 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 MAGEA5P43359 124 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 SLC25A40Q8TBP6 338 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 IGF2BP2-AS1Q96M15 143 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 DCTN5Q9BTE1 182 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 SSBP3Q9BWW4 388 aaPredicted RBP12.31□□□□□ -0.44
XRCC1-201ENST00000262887 DOCK7Q96N67 2140 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 TRGV8A0A0C4DH27 118 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 GGTLC3B5MD39 225 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 J3QW42 95 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 ADH4P08319 380 aa12.31□□□□□ -0.44
XRCC1-201ENST00000262887 DUSP3P51452 185 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms