RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NXT2Q9NPJ8 142 aaKnown RBP3.64□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM74BQ9NUR3 256 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 F8VVB4 439 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 F8VWA3 439 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 HYAL3O43820 417 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-202ENST00000261517 TGFBR1P36897 503 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 GPR146Q96CH1 333 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF488Q96MN9 340 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 SRD5A3Q9H8P0 318 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 LYPD3O95274 346 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 F12P00748 615 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CCL2P13500 99 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CXCL3P19876 107 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 IGHV1-2P23083 117 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CFHR2P36980 270 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 NPBWR2P48146 333 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 C2orf83Q53S99 150 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 VWA1Q6PCB0 445 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 SSMEM1Q8WWF3 244 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 RPLP1P05386 114 aaKnown RBP3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CD59P13987 128 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PRCDQ00LT1 54 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 BSPH1Q075Z2 132 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 LDLRAD3Q86YD5 345 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM101Q96IK0 257 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 SLC25A2Q9BXI2 301 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 FOXJ2Q9P0K8 574 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 MSRB2Q9Y3D2 182 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 H3BMH7 237 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CCL8P80075 99 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CENPVL1A0A0U1RR11 272 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 ERVH48-1M5A8F1 160 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PIN1P1O15428 100 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF250P15622 560 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 RND2P52198 227 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM37Q8WXS4 190 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 AGMATQ9BSE5 352 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 A0A1B0GUT8 65 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 SNURFLB1AK76 121 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 NDUFB8O95169 186 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 IL6RP08887 468 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-202ENST00000261517 GLI4P10075 376 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PF4V1P10720 104 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 EFNB2P52799 333 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PRSS12P56730 875 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 FAM159AQ6UWV7 190 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 WBP1Q96G27 269 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 C4orf51C9J302 202 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 Q6ZS92 163 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 C1orf122Q6ZSJ8 110 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 ARL6IP6Q8N6S5 226 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 NABP2Q9BQ15 211 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 C9JCJ5 164 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PATE4P0C8F1 98 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 GAS1P54826 345 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
VPS13C-202ENST00000261517 YAE1D1Q9NRH1 226 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 K7ERU9 68 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 OR10D4PQ8NGN7 298 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 SIGLEC12Q96PQ1 595 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 DCTN5Q9BTE1 182 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 AUP1Q9Y679 476 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 RNF222A6NCQ9 220 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 FAM231BA6NCW3 169 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 ARL14EPLP0DKL9 152 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PPP1R27Q86WC6 154 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 FAM24BQ8N5W8 94 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 H3BUA1 57 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 LILRA1O75019 489 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 CX3CL1P78423 397 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 INSL4Q14641 139 aa3.63□□□□□ -1.83
VPS13C-202ENST00000261517 PARP12Q9H0J9 701 aaKnown RBP3.63□□□□□ -1.83
VPS13C-202ENST00000261517 IFITM2Q01629 132 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 TCRBV4S1A1TA0A5B7 111 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 C12orf77C9JDV5 145 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF818PQ6ZRF7 136 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 MBD3L1Q8WWY6 194 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 AP5S1Q9NUS5 200 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 IL36BQ9NZH7 164 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
VPS13C-202ENST00000261517 C1orf194Q5T5A4 169 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 PRNTQ86SH4 94 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM183AQ8IXX5 376 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 SLC25A28Q96A46 364 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 RSG1Q9BU20 258 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 B4DSR2 109 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 GDF9O60383 454 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 TYMSP04818 313 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 WNT2P09544 360 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 IZUMO1RA6ND01 250 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 LDLRAD4O15165 306 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 CCL20P78556 96 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM88Q6PEY1 159 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 CLEC9AQ6UXN8 241 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 C1QL4Q86Z23 238 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 SPACA3Q8IXA5 215 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 IGHV3OR15-7A0A075B7D8 119 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 A8MXK9 166 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 PEX7O00628 323 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 PRKNO60260 465 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms