RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 BIVMQ86UB2 503 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 TRAV24A0A0B4J272 114 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 CCL1P22362 96 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 PAPPA-AS1Q5QFB9 102 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 TMEM167AQ8TBQ9 72 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 GTSCR1Q86UQ5 136 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 OR11H4Q8NGC9 324 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 WBP1Q96G27 269 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 LOC102724200A0A096LPH7 203 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-201ENST00000254630 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-201ENST00000254630 IGHV1-46P01743 117 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 TMEM160Q9NX00 188 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 DOCK4Q8N1I0 1966 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 A0A1B0GTI1 187 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 VENTXO95231 258 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 SCGB1A1P11684 91 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 HTN3P15516 51 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 ZP1P60852 638 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 NHLRC3Q5JS37 347 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 TRBV6-7A0A0A0MS04 114 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 GRIFINA4D1Z8 144 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 TCF21O43680 179 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 ZNF385CQ66K41 422 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-201ENST00000254630 PVRIGQ6DKI7 326 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 MYOD1P15172 320 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 GNLYP22749 145 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 UCP1P25874 307 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 CYB5R2Q6BCY4 276 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 PIKFYVEQ9Y2I7 2098 aa7.28□□□□□ -1.24
PTCD3-201ENST00000254630 TDRD6O60522 2096 aaKnown RBP7.27□□□□□ -1.24
PTCD3-201ENST00000254630 FRMPD3Q5JV73 1810 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 H3BRM9 83 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 TBX6O95947 436 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-201ENST00000254630 EGR1P18146 543 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 FOXF2Q12947 444 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 CRIPAKQ8N1N5 446 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 KCNS1Q96KK3 526 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 MRPL13Q9BYD1 178 aaKnown RBP7.27□□□□□ -1.25
PTCD3-201ENST00000254630 UQCR10Q9UDW1 63 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 IGHV3OR16-8A0A075B7F1 116 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 FBLL1A6NHQ2 334 aaKnown RBP7.27□□□□□ -1.25
PTCD3-201ENST00000254630 ATP5G3P48201 142 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 Q5BKY6 102 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 GLMPQ8WWB7 406 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 CACNG8Q8WXS5 425 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 RCC1LQ96I51 464 aaKnown RBP7.27□□□□□ -1.25
PTCD3-201ENST00000254630 TRAV40A0A0B4J280 105 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 RAMP3O60896 148 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 OR10J3Q5JRS4 329 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 SLC25A34Q6PIV7 304 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 FER1L6-AS1Q8NA97 138 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 TIMP3P35625 211 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 GNG5P63218 68 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 EFNB1P98172 346 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 FAM71F2Q6NXP2 309 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 GGNQ86UU5 652 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 SCGB3A1Q96QR1 104 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 TRGV2A0A075B6R0 118 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 A0A1B0GW15 77 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 IL18BPO95998 194 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 CLPSP04118 112 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 WNT2P09544 360 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF324BQ6AW86 544 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-201ENST00000254630 C12orf54Q6X4T0 127 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 LRTM2Q8N967 370 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 WFIKKN1Q96NZ8 548 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 TSC2P49815 1807 aa7.27□□□□□ -1.25
PTCD3-201ENST00000254630 TRAV14DV4A0A0A6YYC5 116 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 IZUMO1RA6ND01 250 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 GAGE10A6NGK3 116 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 APOHP02749 345 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-201ENST00000254630 SLC25A28Q96A46 364 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-201ENST00000254630 PCM1Q15154 2024 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 MUC21A0A0G2JKD1 596 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 MUC21A0A140T8X8 626 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 CDX1P47902 265 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-201ENST00000254630 MUC21Q5SSG8 566 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM170BQ5T4T1 132 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF525Q8N782 197 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 FGFBP3Q8TAT2 258 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 COL4A6Q14031 1691 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 SHISA3A0PJX4 238 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 CBLN1P23435 193 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 Q0VFX4 171 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 ATOH7Q8N100 152 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF414Q96IQ9 312 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 SLC50A1Q9BRV3 221 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 SLC17A3O00476 420 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 CA7P43166 264 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 FAM209BQ5JX69 171 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 REC114Q7Z4M0 266 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 OR5AN1Q8NGI8 311 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 A0A0A6YYD4 124 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms