RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CYB5BO43169 146 aa17.4■□□□□ 0.38
LSM4-201ENST00000252816 HSPE1P61604 102 aaKnown RBP17.4■□□□□ 0.38
LSM4-201ENST00000252816 PRCDQ00LT1 54 aa17.4■□□□□ 0.38
LSM4-201ENST00000252816 SURF2Q15527 256 aaPredicted RBP17.4■□□□□ 0.38
LSM4-201ENST00000252816 TRIM16LQ309B1 348 aa17.4■□□□□ 0.38
LSM4-201ENST00000252816 GPR132Q9UNW8 380 aa17.4■□□□□ 0.38
LSM4-201ENST00000252816 C14orf166Q9Y224 244 aaKnown RBP17.4■□□□□ 0.38
LSM4-201ENST00000252816 IGHV3-21A0A0B4J1V1 117 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 A0A0B4J293 547 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 AKR1C2P52895 323 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 OR2C3Q8N628 320 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 PRRT1Q99946 306 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 THAP7Q9BT49 309 aaPredicted RBP17.39■□□□□ 0.37
LSM4-201ENST00000252816 SLC2A8Q9NY64 477 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 V9GYH0 126 aa17.39■□□□□ 0.37
LSM4-201ENST00000252816 A0A0G2JRQ6 117 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 K7EIM0 57 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 OR5AC1P0C628 307 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 FOLR2P14207 255 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 SPINK9Q5DT21 86 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 Q8N402 240 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 OR1P1Q8NH06 330 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 SCARB1Q8WTV0 552 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 NAA60Q9H7X0 242 aa17.38■□□□□ 0.37
LSM4-201ENST00000252816 IGHV3-35A0A0C4DH35 117 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 ZNF320A2RRD8 509 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 TMEM213A2RRL7 107 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 ZNF701M0R085 212 aaPredicted RBP17.37■□□□□ 0.37
LSM4-201ENST00000252816 B3GALNT1O75752 331 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 NHLRC4P0CG21 123 aaPredicted RBP17.37■□□□□ 0.37
LSM4-201ENST00000252816 CD300EQ496F6 205 aaPredicted RBP17.37■□□□□ 0.37
LSM4-201ENST00000252816 FAM106AQ4KMX7 169 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 LCN12Q6JVE5 192 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 UNQ9165/PRO28630Q6UXU0 137 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 LHFPL5Q8TAF8 219 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 GLYATL2Q8WU03 294 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 CACNG8Q8WXS5 425 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 TRIM63Q969Q1 353 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 TMEM222Q9H0R3 208 aa17.37■□□□□ 0.37
LSM4-201ENST00000252816 TEX13DA0A0J9YY54 714 aaPredicted RBP17.36■□□□□ 0.37
LSM4-201ENST00000252816 OR2T8A6NH00 312 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 F8W735 103 aaPredicted RBP17.36■□□□□ 0.37
LSM4-201ENST00000252816 ST8SIA3O43173 380 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 TGOLN2O43493 480 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 ATG12O94817 140 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 CDS2O95674 445 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 FRMD6-AS1P0C7T7 363 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 ZNF79Q15937 498 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 DEFB114Q30KQ6 69 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 PYDC2Q56P42 97 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 PLET1Q6UQ28 207 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 OR1L6Q8NGR2 347 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 MCUBQ9NWR8 336 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 C21orf62Q9NYP8 219 aa17.36■□□□□ 0.37
LSM4-201ENST00000252816 HUWE1Q7Z6Z7 4374 aaKnown RBP17.35■□□□□ 0.37
LSM4-201ENST00000252816 CRYM-AS1A6NIL9 109 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 A8MWP6 167 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 CBLN1P23435 193 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 KLF9Q13886 244 aaPredicted RBP17.35■□□□□ 0.37
LSM4-201ENST00000252816 Q6ZRM9 215 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 SBSPONQ8IVN8 264 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 ZNF114Q8NC26 417 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 OR2K2Q8NGT1 345 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 DYNLRB2Q8TF09 96 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 PLEKHA3Q9HB20 300 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 SCP2D1Q9UJQ7 156 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 SELENOKQ9Y6D0 94 aa17.35■□□□□ 0.37
LSM4-201ENST00000252816 IGHV4-30-4P0DP06 118 aa17.34■□□□□ 0.37
LSM4-201ENST00000252816 S100A5P33763 92 aa17.34■□□□□ 0.37
LSM4-201ENST00000252816 TM4SF20Q53R12 229 aa17.34■□□□□ 0.37
LSM4-201ENST00000252816 CCDC190Q86UF4 302 aa17.34■□□□□ 0.37
LSM4-201ENST00000252816 TMEM230Q96A57 120 aa17.34■□□□□ 0.37
LSM4-201ENST00000252816 RRNAD1Q96FB5 475 aaKnown RBP17.34■□□□□ 0.37
LSM4-201ENST00000252816 CHRDL1Q9BU40 450 aa17.34■□□□□ 0.37
LSM4-201ENST00000252816 ZNF436Q9C0F3 470 aaPredicted RBP17.34■□□□□ 0.37
LSM4-201ENST00000252816 ZNF785A8K8V0 405 aa17.33■□□□□ 0.36
LSM4-201ENST00000252816 I3L2K1 104 aa17.33■□□□□ 0.36
LSM4-201ENST00000252816 ERHP84090 104 aaKnown RBP17.33■□□□□ 0.36
LSM4-201ENST00000252816 SELENOHQ8IZQ5 122 aaKnown RBP17.33■□□□□ 0.36
LSM4-201ENST00000252816 RNASE11Q8TAA1 199 aaKnown RBP17.33■□□□□ 0.36
LSM4-201ENST00000252816 MISP3Q96FF7 219 aa17.33■□□□□ 0.36
LSM4-201ENST00000252816 BSCL2Q96G97 398 aaPredicted RBP17.33■□□□□ 0.36
LSM4-201ENST00000252816 IFNA17P01571 189 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 ADMP35318 185 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 ETV6P41212 452 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 DHODHQ02127 395 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 SLC35G3Q8N808 338 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 UBAC2Q8NBM4 344 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 UXS1Q8NBZ7 420 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 RBPMSQ93062 196 aaKnown RBP17.32■□□□□ 0.36
LSM4-201ENST00000252816 ATP6V0BQ99437 205 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 C19orf73Q9NVV2 129 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 TECRQ9NZ01 308 aaKnown RBP17.32■□□□□ 0.36
LSM4-201ENST00000252816 U3KQK5 164 aa17.32■□□□□ 0.36
LSM4-201ENST00000252816 STAB2Q8WWQ8 2551 aa17.31■□□□□ 0.36
LSM4-201ENST00000252816 INS-IGF2F8WCM5 200 aa17.31■□□□□ 0.36
LSM4-201ENST00000252816 Q56UQ5 140 aa17.31■□□□□ 0.36
LSM4-201ENST00000252816 SPSB3Q6PJ21 355 aa17.31■□□□□ 0.36
LSM4-201ENST00000252816 SGPP2Q8IWX5 399 aa17.31■□□□□ 0.36
LSM4-201ENST00000252816 MLXQ9UH92 298 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms