RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 DERL1Q9BUN8 251 aa3.9□□□□□ -1.78
RAP1B-201ENST00000250559 KBTBD11-OT1A0A1B0GTJ5 212 aa3.9□□□□□ -1.78
RAP1B-201ENST00000250559 ZNF729A6NN14 1252 aaPredicted RBP3.9□□□□□ -1.78
RAP1B-201ENST00000250559 SNAI2O43623 268 aa3.9□□□□□ -1.78
RAP1B-201ENST00000250559 TCF21O43680 179 aa3.9□□□□□ -1.78
RAP1B-201ENST00000250559 CBLN1P23435 193 aa3.9□□□□□ -1.78
RAP1B-201ENST00000250559 C1orf122Q6ZSJ8 110 aa3.9□□□□□ -1.78
RAP1B-201ENST00000250559 LY6G6EA0A0G2JKS1 128 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 TIMM23O14925 209 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 DLX1P56177 255 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 TMEM116Q8NCL8 245 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 U3KQA8 63 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 PGPEP1LA6NFU8 196 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 NDUFA2O43678 99 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 CENPWQ5EE01 88 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 ASPHD1Q5U4P2 390 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 FAM89BQ8N5H3 189 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 UCP1P25874 307 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 DMRTA2Q96SC8 542 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 ID1P41134 155 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 C2orf83Q53S99 150 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 C10orf55Q5SWW7 151 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 PLSCR2Q9NRY7 297 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 RPRMQ9NS64 109 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 LINC00312Q9Y6C7 94 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 VMO1Q7Z5L0 202 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 MCM3APO60318 1980 aa3.9□□□□□ -1.79
RAP1B-201ENST00000250559 PKIAP61925 76 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 DGAT2L7PQ6IED9 249 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 FAM159AQ6UWV7 190 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 CKS2P33552 79 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 KIR2DL2P43627 348 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 FAM53AQ6NSI3 398 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 CYTL1Q9NRR1 136 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 RLFQ13129 1914 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 GPX1P07203 203 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 PAFAH1B2P68402 229 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 ERASQ7Z444 233 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 OR4D5Q8NGN0 318 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 PMCHL2Q9BQD1 86 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 C7orf71A4D174 169 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 MBD3L4A6NDZ8 208 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 MBD3L3A6NE82 208 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 MBD3L5A6NJ08 208 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 RPLP1P05386 114 aaKnown RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 CCL1P22362 96 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 NPPCP23582 126 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 VDAC2P45880 294 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 SPRNQ5BIV9 151 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 TEX45Q8NA69 505 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 MBD3L2Q8NHZ7 208 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 SPSB4Q96A44 273 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 FBXL7Q9UJT9 491 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 PITPNC1Q9UKF7 332 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 TRBV20OR9-2A0A075B6H5 130 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 DLX6P56179 175 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 FAM209BQ5JX69 171 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF430Q9H8G1 570 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 C15orf61A6NNL5 157 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 PSCAO43653 123 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 ADMP35318 185 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 FXYD7P58549 80 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 C21orf62-AS1Q17RA5 79 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 TM4SF20Q53R12 229 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 EIF4E3Q8N5X7 224 aaKnown RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 RCC1LQ96I51 464 aaKnown RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 RPUSD1Q9UJJ7 312 aaKnown RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 SPATA31B1PQ5VZV4 182 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 TCF24Q7RTU0 167 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 CLDND2Q8NHS1 167 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 CBLN4Q9NTU7 201 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 MPDU1O75352 247 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 CNTFRP26992 372 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 HOXD3P31249 432 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 KLF17Q5JT82 389 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 LINC00518Q8N0U6 118 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF502Q8TBZ5 544 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 GALNT14Q96FL9 552 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 IFITM10A6NMD0 228 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 GCHFRP30047 84 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 NDPQ00604 133 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 MEF2CQ06413 473 aaPredicted RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 DMRTA1Q5VZB9 504 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 EEF1AKMT3Q96AZ1 226 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 TMEM133Q9H2Q1 129 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 BMPERQ8N8U9 685 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 F11RQ9Y624 299 aaKnown RBP3.89□□□□□ -1.79
RAP1B-201ENST00000250559 SCN5AQ14524 2016 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 PSMB2P49721 201 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 BPESC1Q9GZL8 116 aa3.89□□□□□ -1.79
RAP1B-201ENST00000250559 IGKV2-40A0A087WW87 121 aaPredicted RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 IGKV2D-40P01614 121 aaPredicted RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 COL8A2P25067 703 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 RAB37Q96AX2 223 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 MIA3Q5JRA6 1907 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 LOC105371267A0A1B0GV96 52 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 FAM90A26D6RGX4 464 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms