RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 OR5AC1P0C628 307 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 ARL3P36405 182 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 MECP2P51608 486 aaKnown RBP9.75□□□□□ -0.85
VPREB3-201ENST00000248948 DHODHQ02127 395 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 TOMM5Q8N4H5 51 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 OR1P1Q8NH06 330 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 GALNT14Q96FL9 552 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 PRR25Q96S07 402 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 PLEKHA3Q9HB20 300 aa9.75□□□□□ -0.85
VPREB3-201ENST00000248948 A8MWP6 167 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 PPP5D1E7EU14 171 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 LGALS9O00182 355 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 SPNP16150 400 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
VPREB3-201ENST00000248948 SP6Q3SY56 376 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 IL34Q6ZMJ4 242 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 SGPP2Q8IWX5 399 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 OR2K2Q8NGT1 345 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 RNASE11Q8TAA1 199 aaKnown RBP9.74□□□□□ -0.85
VPREB3-201ENST00000248948 RBPMSQ93062 196 aaKnown RBP9.74□□□□□ -0.85
VPREB3-201ENST00000248948 IL22RA2Q969J5 263 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 RRNAD1Q96FB5 475 aaKnown RBP9.74□□□□□ -0.85
VPREB3-201ENST00000248948 B9D2Q9BPU9 175 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 PDCD10Q9BUL8 212 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 SRRQ9GZT4 340 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 LSM4Q9Y4Z0 139 aaKnown RBP9.74□□□□□ -0.85
VPREB3-201ENST00000248948 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
VPREB3-201ENST00000248948 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 LY86O95711 162 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 CSN3P07498 182 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 GP9P14770 177 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 GPR183P32249 361 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 AARDQ4LEZ3 155 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 SLC35G3Q8N808 338 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 GLYATL2Q8WU03 294 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 TMEM230Q96A57 120 aa9.73□□□□□ -0.85
VPREB3-201ENST00000248948 A0A0B4J293 547 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 IGHV3-23P01764 117 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 MFAP2P55001 183 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 SRPXP78539 464 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 DEFB121Q5J5C9 76 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 TMEM268Q5VZI3 342 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 LCN12Q6JVE5 192 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 SPSB3Q6PJ21 355 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 LHFPL5Q8TAF8 219 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 BSCL2Q96G97 398 aaPredicted RBP9.72□□□□□ -0.85
VPREB3-201ENST00000248948 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
VPREB3-201ENST00000248948 GAR1Q9NY12 217 aaKnown RBP9.72□□□□□ -0.85
VPREB3-201ENST00000248948 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 CACFD1Q9UGQ2 172 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 S4R3C0 116 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 TMEM56-RWDD3S4R434 201 aa9.72□□□□□ -0.85
VPREB3-201ENST00000248948 A0A0G2JRQ6 117 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 C2orf70A6NJV1 201 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 K7EIM0 57 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 TGOLN2O43493 480 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 CLEC3BP05452 202 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 ANXA3P12429 323 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
VPREB3-201ENST00000248948 ERHP84090 104 aaKnown RBP9.71□□□□□ -0.86
VPREB3-201ENST00000248948 CD69Q07108 199 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 TRIQKQ629K1 86 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 HAPLN4Q86UW8 402 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 OR52E5Q8NH55 327 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 KCNIP3Q9Y2W7 256 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 SMAD5-AS1Q9Y6J3 95 aa9.71□□□□□ -0.86
VPREB3-201ENST00000248948 CORTO00230 105 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 OR2C1O95371 312 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 IFNA17P01571 189 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 HLA-AP01891 365 aaKnown RBP9.7□□□□□ -0.86
VPREB3-201ENST00000248948 INPP1P49441 399 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 HOXA1P49639 335 aaPredicted RBP9.7□□□□□ -0.86
VPREB3-201ENST00000248948 SUPT4H1P63272 117 aaKnown RBP9.7□□□□□ -0.86
VPREB3-201ENST00000248948 TMEM187Q14656 261 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 RBMS2Q15434 407 aaKnown RBP9.7□□□□□ -0.86
VPREB3-201ENST00000248948 FAM106AQ4KMX7 169 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 SELENOHQ8IZQ5 122 aaKnown RBP9.7□□□□□ -0.86
VPREB3-201ENST00000248948 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 SCARB1Q8WTV0 552 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 TMEM190Q8WZ59 177 aa9.7□□□□□ -0.86
VPREB3-201ENST00000248948 ZNF436Q9C0F3 470 aaPredicted RBP9.7□□□□□ -0.86
VPREB3-201ENST00000248948 A0A0B4J2A0 478 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 DUXBA0A1W2PPF3 345 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 TMEM213A2RRL7 107 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 NAP1L6A6NFF2 107 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 F8W735 103 aaPredicted RBP9.69□□□□□ -0.86
VPREB3-201ENST00000248948 AKR1C4P17516 323 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 SNCAP37840 140 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 ELLP55199 621 aaPredicted RBP9.69□□□□□ -0.86
VPREB3-201ENST00000248948 TMEM128Q5BJH2 165 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms