RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 EP300Q09472 2414 aaPredicted RBP17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 K7EM74 188 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 SCGB1D1O95968 90 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 MT-CO2P00403 227 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 LINC00869P0C866 280 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 OR10J1P30954 320 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 C11orf52Q96A22 123 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 NAGKQ9UJ70 344 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 hADV38S2A0JD32 116 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 LINC00312Q9Y6C7 94 aa17.68■□□□□ 0.42
SH2D3A-201ENST00000245908 A0A0U1RQK1 487 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 ZNF320A2RRD8 509 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 IGKV1-16P04430 117 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 ANKRD39Q53RE8 183 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 KRTCAP3Q53RY4 240 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 ARL6IP6Q8N6S5 226 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 SNRNP40Q96DI7 357 aaKnown RBP17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 SRRM4A7MD48 611 aaKnown RBP17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 FOXH1O75593 365 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 CNN1P51911 297 aaKnown RBP17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 OCC1Q8TAD7 63 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 ELOVL5Q9NYP7 299 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 SLC45A2Q9UMX9 530 aa17.67■□□□□ 0.42
SH2D3A-201ENST00000245908 NPSP0C0P6 89 aa17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 PCP4P48539 62 aa17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 C21orf62-AS1Q17RA5 79 aa17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 OR4P4Q8NGL7 312 aa17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 SGMS2Q8NHU3 365 aa17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 BET1LQ9NYM9 111 aa17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 SLC25A10Q9UBX3 287 aaPredicted RBP17.66■□□□□ 0.42
SH2D3A-201ENST00000245908 NKX6-3A6NJ46 265 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 AREGP15514 252 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 ATP5IP56385 69 aaPredicted RBP17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 RPL31P62899 125 aaKnown RBP17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 PRSS8Q16651 343 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 ZNRD1Q9P1U0 126 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 ARL2-SNX15V9GYD0 113 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 TEX50A0A1B0GTY4 177 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 C2orf83Q53S99 150 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 TMEM108Q6UXF1 575 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 ZNF833PQ6ZTB9 187 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 OR10G8Q8NGN5 311 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 UHRF2Q96PU4 802 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 TRAPPC1Q9Y5R8 145 aa17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 YLPM1P49750 1951 aaKnown RBP17.65■□□□□ 0.42
SH2D3A-201ENST00000245908 PLCE1Q9P212 2302 aa17.64■□□□□ 0.42
SH2D3A-201ENST00000245908 C9JCJ5 164 aa17.64■□□□□ 0.41
SH2D3A-201ENST00000245908 MIR17HGQ75NE6 70 aa17.64■□□□□ 0.41
SH2D3A-201ENST00000245908 LY96Q9Y6Y9 160 aa17.64■□□□□ 0.41
SH2D3A-201ENST00000245908 ZNF318Q5VUA4 2279 aa17.64■□□□□ 0.41
SH2D3A-201ENST00000245908 TNFRSF1AP19438 455 aa17.64■□□□□ 0.41
SH2D3A-201ENST00000245908 GAL3ST2Q9H3Q3 398 aa17.64■□□□□ 0.41
SH2D3A-201ENST00000245908 SAA1P0DJI8 122 aaPredicted RBP17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 COL8A2P25067 703 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 CCL8P80075 99 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 MEF2CQ06413 473 aaPredicted RBP17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 OR5B3Q8NH48 314 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 FAM122AQ96E09 287 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 SLC35E1Q96K37 410 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 NABP2Q9BQ15 211 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 LRFN3Q9BTN0 628 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 CNOT1A5YKK6 2376 aaKnown RBP17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 ICE1Q9Y2F5 2266 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 OR1L8Q8NGR8 309 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 C20orf144Q9BQM9 153 aa17.63■□□□□ 0.41
SH2D3A-201ENST00000245908 IGKV1OR2-108A0A075B7D4 117 aa17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 K7EN84 100 aa17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 HNF1AP20823 631 aa17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 ZNF705AQ6ZN79 300 aaPredicted RBP17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 MOB3BQ86TA1 216 aa17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 OSR1Q8TAX0 266 aaPredicted RBP17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
SH2D3A-201ENST00000245908 C17orf100A8MU93 164 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 ACTL6BO94805 426 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 RNASE2P10153 161 aaKnown RBP17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 RND1Q92730 232 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 MRPL20Q9BYC9 149 aaKnown RBP17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 TMEM167BQ9NRX6 74 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 TRAV9-1A0A075B6T8 112 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 A6NNC1 897 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 ADIPOQQ15848 244 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 MS4A10Q96PG2 267 aa17.61■□□□□ 0.41
SH2D3A-201ENST00000245908 APOA2P02652 100 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 YPEL3P61236 119 aaPredicted RBP17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 PNKDQ8N490 385 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 EAF1Q96JC9 268 aaPredicted RBP17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 MIEN1Q9BRT3 115 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 TECRQ9NZ01 308 aaKnown RBP17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 IL36BQ9NZH7 164 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 A0A0G2JNJ9 132 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 C16orf97H3BN30 126 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 PSG5Q15238 335 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 TBX15Q96SF7 602 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 LPAR2Q9HBW0 351 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 Q9UFV3 132 aa17.6■□□□□ 0.41
SH2D3A-201ENST00000245908 DPRXA6NFQ7 191 aa17.59■□□□□ 0.41
SH2D3A-201ENST00000245908 H0YJW9 148 aa17.59■□□□□ 0.41
SH2D3A-201ENST00000245908 OR5G3P0C626 314 aa17.59■□□□□ 0.41
SH2D3A-201ENST00000245908 BRS3P32247 399 aa17.59■□□□□ 0.41
SH2D3A-201ENST00000245908 WFDC8Q8IUA0 241 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms