RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 TMEM140Q9NV12 185 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 IL36BQ9NZH7 164 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 C2CD3Q4AC94 2353 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 PFN1P07737 140 aaKnown RBP7.76□□□□□ -1.17
COL21A1-201ENST00000244728 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 S100A4P26447 101 aaKnown RBP7.76□□□□□ -1.17
COL21A1-201ENST00000244728 CENPWQ5EE01 88 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 UNQ6494/PRO21346Q6UXR6 183 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 SPSB4Q96A44 273 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 NDFIP1Q9BT67 221 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 DERL1Q9BUN8 251 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 IGHV3OR16-10A0A075B7F0 116 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 TMSB15BA0A087X1C1 80 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 F2RL2O00254 374 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 TMEM42Q69YG0 159 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 TEX38Q6PEX7 206 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 HS3ST6Q96QI5 342 aa7.76□□□□□ -1.17
COL21A1-201ENST00000244728 SSBP3Q9BWW4 388 aaPredicted RBP7.76□□□□□ -1.17
COL21A1-201ENST00000244728 DPRXA6NFQ7 191 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 CD40P25942 277 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 PAX9P55771 341 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 TIMM23BQ5SRD1 257 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 MUC15Q8N387 334 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 FAM19A2Q8N3H0 131 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 SNHG12Q9BXW3 62 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 PCDH15Q96QU1 1955 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 RRHO14718 337 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 DLEU1O43261 78 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 LILRA1O75019 489 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 SELLP14151 372 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 ZNF137PP52743 207 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 TMPRSS3P57727 454 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 RSPO1Q2MKA7 263 aaPredicted RBP7.75□□□□□ -1.17
COL21A1-201ENST00000244728 LEMD1Q68G75 181 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 LINC01551Q86U37 167 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 PDPNQ86YL7 162 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 GSX1Q9H4S2 264 aaPredicted RBP7.75□□□□□ -1.17
COL21A1-201ENST00000244728 THYN1Q9P016 225 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 TCF19Q9Y242 345 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 HTR1DP28221 377 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 BSPH1Q075Z2 132 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 ACP7Q6ZNF0 438 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 FA2HQ7L5A8 372 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 STPG3Q8N7X2 389 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 OCC1Q8TAD7 63 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 BPTFQ12830 3046 aa7.75□□□□□ -1.17
COL21A1-201ENST00000244728 CGAP01215 116 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 RPL27AP46776 148 aaKnown RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 UCNP55089 124 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 PEAR1Q5VY43 1037 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 RASL11BQ9BPW5 248 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 SFXN3Q9BWM7 321 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 RNF115Q9Y4L5 304 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 AMMECR1Q9Y4X0 333 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 S4R3C0 116 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 IGKV1-6A0A0C4DH72 117 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 RPL8P62917 257 aaKnown RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 NRN1Q9NPD7 142 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 ANKRD11Q6UB99 2663 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 FOXI3A8MTJ6 420 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 IL6RP08887 468 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 CCL3L1P16619 93 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 ZNF726P1Q15940 193 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 PMCHL1Q16048 86 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 RNFT1Q5M7Z0 435 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 ASCL4Q6XD76 172 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 DMRTC2Q8IXT2 367 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 PARD6GQ9BYG4 376 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-201ENST00000244728 SEMA5BQ9P283 1151 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 RAXQ9Y2V3 346 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 ARHGAP21Q5T5U3 1957 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 IFITM10A6NMD0 228 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 OR2J3O76001 311 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 LINC00869P0C866 280 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 LGALS7P47929 136 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 C20orf204Q6ZNR8 217 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 TMEM208Q9BTX3 173 aa7.74□□□□□ -1.17
COL21A1-201ENST00000244728 PPIAL4CA0A0B4J2A2 164 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 AMY1AP04745 511 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 PPIAL4GP0DN37 164 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 HTN1P15515 57 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 GFRA1P56159 465 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 C10orf113Q5VZT2 155 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 PCSK4Q6UW60 755 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 ST6GALNAC3Q8NDV1 305 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 PRSS3P2Q8NHM4 247 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 RNASEH2CQ8TDP1 164 aaKnown RBP7.73□□□□□ -1.17
COL21A1-201ENST00000244728 AGMATQ9BSE5 352 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 HSPB7Q9UBY9 170 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 IGHV1-69-2A0A0G2JMI3 117 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 TNFSF13O75888 250 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 GOSR1O95249 250 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 FCER1GP30273 86 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 HSPE1P61604 102 aaKnown RBP7.73□□□□□ -1.17
COL21A1-201ENST00000244728 NHLH1Q02575 133 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms