RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CEP250Q9BV73 2442 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 ACTL6BO94805 426 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 TNFSF4P23510 183 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 CD40P25942 277 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 G0S2P27469 103 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 MOB3BQ86TA1 216 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 LINC00574Q9H8X3 128 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
HIF3A-202ENST00000244303 GVINP1Q7Z2Y8 2422 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 UPK2O00526 184 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 LINC00869P0C866 280 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 MIR17HGQ75NE6 70 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 CBLN4Q9NTU7 201 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 MUC6Q6W4X9 2439 aa11.75□□□□□ -0.53
HIF3A-202ENST00000244303 AKAP13Q12802 2813 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 K7EN84 100 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 M0R143 59 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 MT-CO2P00403 227 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 IRF2P14316 349 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 RTL8BQ17RB0 113 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 DOLPP1Q86YN1 238 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 RND1Q92730 232 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 CORO2AQ92828 525 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-202ENST00000244303 FNDC10F2Z333 226 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-202ENST00000244303 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-202ENST00000244303 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 CCL8P80075 99 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 SNHG12Q9BXW3 62 aa11.74□□□□□ -0.53
HIF3A-202ENST00000244303 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 TEX50A0A1B0GTY4 177 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 FOXC1Q12948 553 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 C11orf52Q96A22 123 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 UHRF2Q96PU4 802 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 NABP2Q9BQ15 211 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 CHODLQ9H9P2 273 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
HIF3A-202ENST00000244303 A0A0G2JNJ9 132 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 PRRG2O14669 202 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 SAA1P0DJI8 122 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-202ENST00000244303 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-202ENST00000244303 CASP6P55212 293 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 Q9UFV3 132 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 hADV38S2A0JD32 116 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 SLC17A3O00476 420 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 PSG5Q15238 335 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 TMEM256Q8N2U0 113 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 Q8NA96 180 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 LINC00312Q9Y6C7 94 aa11.72□□□□□ -0.53
HIF3A-202ENST00000244303 OR10J1P30954 320 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 ADMP35318 185 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 MLANAQ16655 118 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 C1orf194Q5T5A4 169 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 ZCCHC24Q8N2G6 241 aaKnown RBP11.71□□□□□ -0.53
HIF3A-202ENST00000244303 NUP37Q8NFH4 326 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 OR10W1Q8NGF6 305 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
HIF3A-202ENST00000244303 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
HIF3A-202ENST00000244303 ARFGEF3Q5TH69 2177 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 C9JCJ5 164 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 AREGP15514 252 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 C2orf83Q53S99 150 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 ZNF705AQ6ZN79 300 aaPredicted RBP11.71□□□□□ -0.54
HIF3A-202ENST00000244303 ZNF833PQ6ZTB9 187 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 SPACA3Q8IXA5 215 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 EAF1Q96JC9 268 aaPredicted RBP11.71□□□□□ -0.54
HIF3A-202ENST00000244303 MRPL20Q9BYC9 149 aaKnown RBP11.71□□□□□ -0.54
HIF3A-202ENST00000244303 IL36BQ9NZH7 164 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 POLR3KQ9Y2Y1 108 aaPredicted RBP11.71□□□□□ -0.54
HIF3A-202ENST00000244303 ZGRF1Q86YA3 2104 aa11.71□□□□□ -0.54
HIF3A-202ENST00000244303 ATMQ13315 3056 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 NKX6-3A6NJ46 265 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
HIF3A-202ENST00000244303 CCL3L1P16619 93 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
HIF3A-202ENST00000244303 ZNF90Q03938 601 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 ZNF503Q96F45 646 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 TBR1Q16650 682 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 GFRALQ6UXV0 394 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 OR5B3Q8NH48 314 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 HARBI1Q96MB7 349 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 TBX15Q96SF7 602 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
HIF3A-202ENST00000244303 TMEM167BQ9NRX6 74 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms