RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 ADH4P08319 380 aa9.82□□□□□ -0.84
SEC61A1-201ENST00000243253 FAM27E3Q08E93 113 aa9.82□□□□□ -0.84
SEC61A1-201ENST00000243253 KRTCAP3Q53RY4 240 aa9.82□□□□□ -0.84
SEC61A1-201ENST00000243253 OR4A16Q8NH70 328 aa9.82□□□□□ -0.84
SEC61A1-201ENST00000243253 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
SEC61A1-201ENST00000243253 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
SEC61A1-201ENST00000243253 IGHV3-72A0A0B4J1Y9 119 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 CDKN1AP38936 164 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 Q0VG73 95 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 OR2V2Q96R30 315 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 SERTAD4Q9NUC0 356 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 IL36BQ9NZH7 164 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 GRIFINA4D1Z8 144 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 TCAPO15273 167 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 IGLV2-8P01709 118 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 OR10J4P0C629 311 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 FTH1P19P0C7X4 201 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 MRPL52Q86TS9 123 aaKnown RBP9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 IGFBPL1Q8WX77 278 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 NEUROG1Q92886 237 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 POLQO75417 2590 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 IGHG3P01860 377 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 CCL13Q99616 98 aa9.81□□□□□ -0.84
SEC61A1-201ENST00000243253 IGKV1OR2-108A0A075B7D4 117 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 PLAUP00749 431 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 LHBP01229 141 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 GCHFRP30047 84 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 OR10J1P30954 320 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 CTRLP40313 264 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 KIR2DL2P43627 348 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 MOB3BQ86TA1 216 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 FAM103A1Q9BTL3 118 aaKnown RBP9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 SFXN3Q9BWM7 321 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 TUBG2Q9NRH3 451 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 JPT1Q9UK76 154 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 K7EM74 188 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 SPINT2O43291 252 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 CFHR2P36980 270 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 TCL1AP56279 114 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 RPL31P62899 125 aaKnown RBP9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 C17orf58Q2M2W7 97 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 ZNF705AQ6ZN79 300 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 BTF3L4Q96K17 158 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 A0A1W2PRD5 423 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 A0A1W2PRF3 423 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 A0A1W2PRM7 423 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 C15orf61A6NNL5 157 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 SRRM5B3KS81 715 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 CBLN1P23435 193 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 ITLN1Q8WWA0 313 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 CCL17Q92583 94 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 EAF1Q96JC9 268 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 LRFN3Q9BTN0 628 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 PROCRQ9UNN8 238 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 FOXA2Q9Y261 457 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
SEC61A1-201ENST00000243253 USP9YO00507 2555 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 SLC17A3O00476 420 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 RPL29P47914 159 aaKnown RBP9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 NHLRC2Q8NBF2 726 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 ZNF439Q8NDP4 499 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 PSMB11A5LHX3 300 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 ITGB1BP1O14713 200 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 TNFSF13O75888 250 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 SERF1AO75920 110 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 PRDX2P32119 198 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 TRAT1Q6PIZ9 186 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 PTPN13Q12923 2485 aa9.79□□□□□ -0.84
SEC61A1-201ENST00000243253 FNDC10F2Z333 226 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 H3BTX0 84 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 ENSAO43768 121 aaKnown RBP9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 FAM216BQ8N7L0 139 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 STPG3Q8N7X2 389 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 SAA2-SAA4A0A096LPE2 208 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 ERVK-16P61578 105 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 MLANAQ16655 118 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 GCSAMQ8N6F7 178 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 ST6GALNAC3Q8NDV1 305 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 IGF2BP2-AS1Q96M15 143 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 NPVFQ9HCQ7 196 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 DKK4Q9UBT3 224 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 CGAP01215 116 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 POU2AF1Q16633 256 aa9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
SEC61A1-201ENST00000243253 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.84
SEC61A1-201ENST00000243253 PAFAH1B2P68402 229 aa9.77□□□□□ -0.84
SEC61A1-201ENST00000243253 SMIM21Q3B7S5 101 aa9.77□□□□□ -0.84
SEC61A1-201ENST00000243253 CMTM2Q8TAZ6 248 aa9.77□□□□□ -0.84
SEC61A1-201ENST00000243253 TBX15Q96SF7 602 aa9.77□□□□□ -0.84
SEC61A1-201ENST00000243253 CT45A1Q5HYN5 189 aa9.77□□□□□ -0.85
SEC61A1-201ENST00000243253 KIR3DL3Q8N743 410 aa9.77□□□□□ -0.85
SEC61A1-201ENST00000243253 CT45A3Q8NHU0 189 aa9.77□□□□□ -0.85
SEC61A1-201ENST00000243253 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
SEC61A1-201ENST00000243253 NCOR1P1Q9H4R4 102 aa9.77□□□□□ -0.85
SEC61A1-201ENST00000243253 LINC00574Q9H8X3 128 aa9.77□□□□□ -0.85
SEC61A1-201ENST00000243253 ENY2Q9NPA8 101 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms