RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PRSS46E5RG02 174 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 H7BYZ3 331 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 PHOX2AO14813 284 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 PPP1R2P9O14990 202 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 IFNA10P01566 189 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 TRGC2P03986 189 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 TFF1P04155 84 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 CLEC3BP05452 202 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 FABP1P07148 127 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 NDUFA6P56556 154 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 RPL23P62829 140 aaKnown RBP6.4□□□□□ -1.38
CXCR4-201ENST00000241393 ADIRFQ15847 76 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 STUMQ69YW2 141 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 SLC16A13Q7RTY0 426 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 LRP11Q86VZ4 500 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 OR10A7Q8NGE5 316 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 ITLN1Q8WWA0 313 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 CORO2AQ92828 525 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 OR5B12Q96R08 314 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 TCF19Q9Y242 345 aa6.4□□□□□ -1.38
CXCR4-201ENST00000241393 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.38
CXCR4-201ENST00000241393 TRGV10A0A0A0MS01 117 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 A0A1W2PPV4 95 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 ZNF729A6NN14 1252 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 TYMSP04818 313 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 SRP14P37108 136 aaKnown RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 EDDM3BP56851 147 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 C17orf58Q2M2W7 97 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 NCMAPQ5T1S8 102 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 NUP37Q8NFH4 326 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 OR51G1Q8NGK1 321 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 OR4F5Q8NH21 305 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 RNF183Q96D59 192 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 OR4F4Q96R69 305 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 TMEM204Q9BSN7 226 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 GSN-AS1Q9NRJ2 163 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 PITPNC1Q9UKF7 332 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 ZNF257Q9Y2Q1 563 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 DMDP11532 3685 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 FREM2Q5SZK8 3169 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 IGHV3OR15-7A0A075B7D8 119 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 PGPEP1LA6NFU8 196 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 IFITM10A6NMD0 228 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 C11orf94C9JXX5 98 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 SPRY3O43610 288 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 PAGE4O60829 102 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 HRASP01112 189 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 TRGC1P0CF51 173 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 STAG3L2P0CL84 134 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 STAG3L3P0CL85 134 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 LINC00205P59089 165 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 HSPE1P61604 102 aaKnown RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 TNFAIP6P98066 277 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 RAB31Q13636 194 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 LTC4SQ16873 150 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 RPL39P5Q59GN2 51 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 CT45A1Q5HYN5 189 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 COA6Q5JTJ3 125 aaKnown RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 C16orf82Q7Z2V1 217 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 HIST3H2BBQ8N257 126 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 ZNRF1Q8ND25 227 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 ZNF439Q8NDP4 499 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 CT45A3Q8NHU0 189 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 FAM57AQ8TBR7 257 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 RPUSD4Q96CM3 377 aaKnown RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 IMMP2LQ96T52 175 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 GGTLC1Q9BX51 225 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 NPVFQ9HCQ7 196 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 IDI2-AS1Q9NZ38 188 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 PRNDQ9UKY0 176 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 LSM4Q9Y4Z0 139 aaKnown RBP6.39□□□□□ -1.39
CXCR4-201ENST00000241393 ARL2-SNX15V9GYD0 113 aa6.39□□□□□ -1.39
CXCR4-201ENST00000241393 HEATR1Q9H583 2144 aaKnown RBP6.38□□□□□ -1.39
CXCR4-201ENST00000241393 A8MXE2 369 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 GGCTO75223 188 aaKnown RBP6.38□□□□□ -1.39
CXCR4-201ENST00000241393 YIF1AO95070 293 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 CXorf1O96002 111 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 IGHV1-46P01743 117 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 GYPAP02724 150 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 NPY1RP25929 384 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 GALR1P47211 349 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 LCN2P80188 198 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 MRPS11P82912 194 aaKnown RBP6.38□□□□□ -1.39
CXCR4-201ENST00000241393 HNF4GQ14541 408 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 SSX2Q16385 188 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 C10orf25Q5T742 122 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 FRZBQ92765 325 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 GAFA1Q96PS6 74 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 ENY2Q9NPA8 101 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 MIOXQ9UGB7 285 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 PXMP4Q9Y6I8 212 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 PRR14LQ5THK1 2151 aa6.38□□□□□ -1.39
CXCR4-201ENST00000241393 EP300Q09472 2414 aaPredicted RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SAA2-SAA4A0A096LPE2 208 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 hADV38S2A0JD32 116 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms