RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PIGBOS1A0A0B4J2F0 54 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 A0A1W2PN81 502 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 TYMSP04818 313 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 IGHV1-2P23083 117 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 SELENOVP59797 346 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 PRAMEF6Q5VXH4 476 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 C11orf53Q8IXP5 236 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 MMD2Q8IY49 270 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 NHLRC2Q8NBF2 726 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 OR10P1Q8NGE3 313 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 CLEC7AQ9BXN2 247 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 SEPSECSQ9HD40 501 aaKnown RBP7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 KCNIP1Q9NZI2 227 aa7.8□□□□□ -1.16
HLA-DOA-201ENST00000229829 TMEM8BA6NDV4 472 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 PPIAL4DF5H284 164 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 ACTL6BO94805 426 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 CA1P00915 261 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 IGHV3-13P01766 116 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 IGHV3-7P01780 117 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 HES3Q5TGS1 186 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 Q8IYB0 196 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 OR1N2Q8NGR9 330 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 KLF14Q8TD94 323 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 SSMEM1Q8WWF3 244 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 SARAFQ96BY9 339 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 AGMATQ9BSE5 352 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 TMEM147Q9BVK8 224 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 GTSF1LQ9H1H1 148 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 ARRDC1-AS1Q9H2J1 176 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 ABI3Q9P2A4 366 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 TMEM30CPA0ZSE6 113 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 YPEL1O60688 119 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 OR13A1Q8NGR1 328 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 YPEL2Q96QA6 119 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 SSBP3Q9BWW4 388 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 TIMM9Q9Y5J7 89 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 GPR6P46095 362 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 COMPP49747 757 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 ZNF83P51522 516 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 NHLH1Q02575 133 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 RPEL1Q2QD12 228 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 Q8N7P7 452 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 MDS2Q8NDY4 140 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 OR2T6Q8NHC8 308 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 GMPPAQ96IJ6 420 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 QTRT1Q9BXR0 403 aaKnown RBP7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 FAM234AQ9H0X4 552 aa7.79□□□□□ -1.16
HLA-DOA-201ENST00000229829 CA2P00918 260 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 IGLL1P15814 213 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 ARG2P78540 354 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 PSG9Q00887 426 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 H2BFWTQ7Z2G1 175 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 OR8B2Q96RD0 313 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 RNASE7Q9H1E1 156 aaKnown RBP7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 PSG11Q9UQ72 335 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 GVINP1Q7Z2Y8 2422 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 A0A087X0K7 114 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 TRGV5A0A0B4J1U4 118 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 A0A1W2PS18 150 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 SH2D7A6NKC9 451 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 KLRC4-KLRK1H3BQV0 150 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 PROP1O75360 226 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 CLDN14O95500 239 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 PPBPP02775 128 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 USF1P22415 310 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 VKORC1L1Q8N0U8 176 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 HINT2Q9BX68 163 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 NCOR1P1Q9H4R4 102 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 HES4Q9HCC6 221 aa7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 TET2Q6N021 2002 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-201ENST00000229829 IGHV1-69-2A0A0G2JMI3 117 aa7.77□□□□□ -1.16
HLA-DOA-201ENST00000229829 IQCF6A8MYZ5 107 aa7.77□□□□□ -1.16
HLA-DOA-201ENST00000229829 OR9G9P0C7N8 305 aa7.77□□□□□ -1.16
HLA-DOA-201ENST00000229829 KLF13Q9Y2Y9 288 aaPredicted RBP7.77□□□□□ -1.16
HLA-DOA-201ENST00000229829 DMXL1Q9Y485 3027 aa7.77□□□□□ -1.16
HLA-DOA-201ENST00000229829 INTS1Q8N201 2190 aaKnown RBP7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 DYSFO75923 2080 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 OOEPA6NGQ2 149 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 C15orf62A8K5M9 175 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 VENTXO95231 258 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 ARL14EPLP0DKL9 152 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 CATR1Q13166 79 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 SAMD13Q5VXD3 122 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 ZNF331Q9NQX6 463 aaPredicted RBP7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 PCNX2A6NKB5 2137 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 TRBV20OR9-2A0A075B6H5 130 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 RPL31P62899 125 aaKnown RBP7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 FOXF2Q12947 444 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 EDDM3AQ14507 147 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 WDR82Q6UXN9 313 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 KCNS1Q96KK3 526 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 HILPDAQ9Y5L2 63 aa7.77□□□□□ -1.17
HLA-DOA-201ENST00000229829 MGAQ8IWI9 3026 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms